| Acc. |
TCSL71867 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Biotin carboxylase 1, chloroplastic OS=Populus trichocarpa E-value=0; Biotin carboxylase 2, chloroplastic OS=Populus trichocarpa E-value=0; Biotin carboxylase, chloroplastic OS=Arabidopsis thaliana E-value=0; Biotin carboxylase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) E-value=0; Biotin carboxylase 1 OS=Bacillus subtilis (strain 168) E-value=0; |
| Length |
2041 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SRR015436 (6 ESTs); SRR015435 (2 ESTs); SL_SEED (2 ESTs); SL_SUS_LEAF (1 ESTs); LIBEST_025266 (1 ESTs); SL_ROOT_pre-anthesis (1 ESTs); SL_RES (1 ESTs); SL_TAMU (1 ESTs); |
| Sequence |
GGCCATTACGGCCGGGGAATCTTGTTTGGAACAGAGTCTTCAGTTTTATTGCTTTCTTGT
TTTCATCGACATCATCAACTTCTCATTCTTCAAATCTACCGCACACCCACCTCCTCATTC
ATTCTCATTTCTCTGTCAGAGTAGTAATTGTTCTTGCAGGAAGACAGGAATCGGATTACA
TTGATCAGGAAATGGATTCTGCAGCCATGACTAGCGTTTGTGGCAAATCTGCTCTTTGCT
CTACTCCCGGTTTATTTTTGGGGAGAACGAGCGGTATTAGGAGCTCGCAGTGTAGCTTTA
TAGCTGGAAATAGGATAAACTTTCCAAGGCAGACAGCTCAAGCACACAGAGTTCGTACTA
ATTCTCGCAAGGGTCATGGTGCTCTTACTGTGACATGCCGCGCCGAGAAAATTTTGGTGG
CAAATAGAGGAGAGATTGCTGTTCGCGTGATCCGAACTGCCCATGAGATGGGAATTCCTT
GTGTTGCGGTTTATTCGACCATTGATAAAGATGCCTTACATGTGAAGCTAGCTGATGAAT
CTGTTTGCATTGGAGAAGCACCAAGTAATCAGTCGTATTTAGTGATCCCAAATGTCTTGT
CTGCTGCTATCAGTCGCGGATGTACAATGTTGCATCCTGGATATGGTTTCCTTTCTGAGA
ATGCAAGTTTTGTTGAGATGTGCAGAGAACATGGAATCAACTTTATTGGGCCAAATCCAG
ACAGCATAAGAGTCATGGGTGACAAAGCCACTGCTAGAGATACAATGAAGAATGCTGGTG
TTCCAACTGTACCAGGAAGTGACGGACTATTGCAGAGTACTGAAGAAGGTGTAAAGCTTG
CCGAGGAGATTGGTTACCCCGTGATGATTAAGGCAACAGCTGGTGGTGGTGGACGTGGAA
TGCACTTGCTAAAGAACCTAACGAGTTCGTAAAATTATTGCAGCAAGCTAAGAGTGAAGC
AGCAGCTGCATTTGGAAATGATGGCGTTTATCTGGAGAAGTACATCGTAAATCCTAGGCA
CATTGAATTTCAGGTTTTGGCGGACAAGTATGGTAATGTTGTACACTTTGGAGAGCGTGA
TTGCAGTATTCAGAGAAGAAACCAAAAGTTGCTGGAGGAAGCACCATCCCCGGCATTGAC
ACCAGAGCTGAGGAAAGCCATGGGTGATGCAGCTGTGGCAGCAGCAGCATCTATAGGTTA
CATTGGTGTTGGAACCATAGAGTTCCTATTGGATGAGAGAGGCTCCTTTTACTTCATGGA
AATGAACACTCGTATTCAGGTAGAGCATCCGGTGACAGAAATGATATCCTCTGTTGATCT
GATAGAGGAACAGATCCGTGTCGCTATGGGAGAAAAGCTCCGATACAAACAGGAGGATAT
TGTGCTTAGAGGACATTCAATTGAATGCCGTATAAACGCAGAAGATGCTTTCAAAAACTT
CAGACCCGGCCCAGGGAGAATCACTTCATATTTACCAGCTGGAGGTCCATTTACGCGTAT
GGATAGCCATGTTTATCCTGACTATGTGGTTCCACCTAGCTACGATTCCCTGCTAGGAAA
GCTCATCGTATGGGCTCCAACACGCGAGAGGGCTATTGAGCGCATGAAAAGAGCACTTGA
TGACACCGTTATCACTGGAGTTCCTACCACAATAGAATATCATAAACTCATCCTTGATAT
CGAGGACTTTAAGAACGGGAAAGTTGATACTGCTTTCATTCCAAAGCATGAGGAAGAGTT
AGCTCCGCCTCAGCAAATTGTTCCAGCAGCAAGCAAGGAGCTGATCAATGCCAATGCTTA
ATTATTCTTCTATTTTAGTTTTAGTTTTTTCTTCTTTGATTTTCTTACTTCATCAAGTGA
ATTTAGTTTAAGAACATTACTCTCATTGGAACTTGAAGTGAGTGCATTTTTGGATATAAC
TTTCATCTCCTTTTATCTTTAGCTTGTTGTATTTAAAGATACACAAGACTGAATGAAATT
ATTCTCTTTTTAGAAAAAAAAAAGAAAAAAAACAAAACATGTCCGGCCGCCTCGGTCTCT
A
|
| EST members of Unigene |
SRR015435.81681 SRR015435.139779 DB690254 SRR015436.318905 SRR015435.93670 SRR015435.115359 AW036136 SRR015436.27338 GT164676 SRR015436.272504 BP881961 SRR015435.189561 BI925898 BP906672 AI779648 SRR015436.98069 SRR015436.34396 AI483969 SRR015436.307144 AW222488 SRR015435.188839 DB705378 SRR015436.106274 SRR015436.162823 SRR015436.182633 SRR015436.92310 BP898269 BF113756 SRR015436.223350 SRR015436.136570 BP877588 AW036151 FS204947 AI773901
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Amino Acid Metabolism > ko00280 Valine, leucine and isoleucine degradation > K01968 3-methylcrotonyl-CoA carboxylase alpha subunit |
| EC |
6.4.1.4 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
833497
|
| Trichome-related Gene from Literature |
833497
|