Detail of EST/Unigene TCHL53959
Acc. TCHL53959
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana E-value=0; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica E-value=0; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) E-value=0; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) E-value=4e-88; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) E-value=4e-88;
Length 1841 nt
Species Humulus lupulus
Belonged EST Libraries SRR546165 (25 ESTs); HL_TRI (13 ESTs); SRR546172 (13 ESTs); HLUTR3CH (7 ESTs); SRR546170 (7 ESTs); SRR546168 (6 ESTs); HLUTR2CH (4 ESTs); HLUPJN1 (1 ESTs); HLUPLC (1 ESTs);
Sequence ACCATAAATAGAAAATGACCCTAGGACATTTCCTATGCCCCCATTTTAGAATTATCCAAT
AAAGTGAACGTTAAAGTTTTGTATAAATGATGGAGAGGCATTACAATGATGTTTCTTACA
CTACTGTTTTAAGTATAATACTGATTTTTTTTGGTGGGTACTAAAACCATTCATATTGTG
CTTCTGTTTCATCATTTTAATTCTTACTTAATCAAGAAACATATACAGCAGTGTTCTTTC
GCTGCTGCCTTTTATTTCTATCTACCAATGATGATTCATACTCTTCATTCTTCTTCTGAG
GGTGGTTCAACCCAGCGGCCATGATCTTTTATTAGCTGGATCAATGCATCGGTAGCTTGT
TCCATTGCGATTCCACGCTGCACCACGGTCTTTCCAACATAAAGGTCAATCTTTCCAGGA
GCACCACCAACATAACCAAAGTCTGCATCAGCCATCTCTCCAGGTCCATTAACGATGCAA
CCCATGATAGCAATTGAGACACCAGGCAGGTGTGATGTCTTCTCCCGTATCTCTGCACTT
ATTTCTTGAAGGTCAAACAAAGTTCTACCACAGGATGGGCACGAGACATACTCCGTCTTT
GTATTCCGCATTCTACAACCTTGTAGTAGGTTGAAAGATGTATTTCTAAGAAAATCAAAA
TCCTGATCTGGAGCTTCCAAGAGGATACCATCTCCAAGTCCATCTACTAAAAGGGCCCCA
GCATTGCTACCTGCACCGATGACTAAGTCATCCCTATGGATTCCATTTGGAAACTGAATG
TGGTGTATTACAGGAAAGTTCAGGGAATTATCTGATAGATACTCAAATAGCCTCCTTGCT
GAGTGCACTCTGCTAATTTTATGTTCATCAAATGGCAGATCATGAAGAATCATAGTAACA
TCGATGCCTTTGAGAATCTCCAGTTCTTCGTAAGGTTCATCACCTCGTAAGGATACAACC
AAACGCGTGCCTTCTGGCAAAAGCTTGTATGCACCAGTTGATAACTCCTTAAGATTTACC
AAAACCATGGCATTCGCCAATGGCTTTGTAAGCTGCTCTGACAAAGGAGTTATGATCCCC
ATACTTATGTCTATCAACCTTTTGAGAGCTAGTCGAGCATTGTCATCATCAACAGGTGGA
AGTTGTCTCAATAAGATGGAGTCTGCTGTTGCCAGATCCTTAAATGGCATGCCGACAACA
AGCTTTGCTGCTAGTGACCTGTACAGTAGCTCTGGCATCTTTAATTTATCAAGAGAAACT
GACATGAGAACAGAACCATCACGGTGCAGAACACCTCTATAGTCTACCTCATCACCCTCC
TTCTGTGTAGGCAGTTGACCAGTTCGTCGTTGAAAATCAAAATAATGTCTGTGCTTCTCT
TCAAATGGGGCCACTCCTTGCTGAAGATCAGCCGCTTTTGTACCCAAATTGGCCAACCTT
CTGCAGGGATCAATCTCCTCCTCAGGCGGTTCAGTGAGTGAAACCCTGATAGTATCACCC
AAACCATCCTGAAGAAGGGTCCCAATGCCAATTGCAGATTTCATCCGCCCATCCTCACCT
TCTCCTGCTTCAGTGACTCCCAAGTGAAGTGGATACTCCCAGCCCTGGACATACATTTCA
GCAACAAGAAGACGGTATGCCTGGACCATGACGACTGGGTTGCTTGCTTTCATTGAAAAC
ACAAAATTATGGAAGTCCAACTTCCGGCAAATCCTTGCAAACTCAAATGCAGATTCAACC
ATTCCCCTTGGAGAATCTCCATAGTAGCTCATGATACGATCTGAAAGACTCCCATGGTTT
GTCCCAATGCGCATTGCTCTACCATATTTTTTACATTTCTC
EST members of Unigene ES655942  SRR546172.83508  ES657822  SRR546172.89313  SRR546165.24312  SRR546170.20645  SRR546172.161192  SRR546165.32422  SRR546172.166007  SRR546172.85233  GD248330  SRR546165.295995  GD248408  SRR546172.76149  EX519709  SRR546170.10187  SRR546168.21208  SRR546165.18711  GD251083  SRR546172.60003  ES658165  ES658642  SRR546170.155936  SRR546172.1800  ES656416  SRR546170.25123  ES656406  GD242792  ES653061  SRR546172.149629  GD249309  SRR546172.20926  SRR546165.73224  SRR546165.152449  SRR546168.3664  SRR546165.311721  SRR546165.308541  SRR546172.119238  GD251188  SRR546165.145016  ES658393  ES656856  SRR546172.96191  SRR546165.209353  SRR546165.49927  GD245997  SRR546165.47409  SRR546165.132435  SRR546168.134756  SRR546170.152891  SRR546165.75613  ES658285  GD252578  GD252888  SRR546165.81631  SRR546165.239324  SRR546165.132494  SRR546172.84441  SRR546165.280134  EX519670  SRR546165.215197  ES656238  GD250473  GD252694  SRR546170.8607  SRR546168.68708  GD248467  GD248464  SRR546165.186573  SRR546165.283001  SRR546168.50341  SRR546165.184442  SRR546165.211064  SRR546168.93946  SRR546165.56461  SRR546170.6036  SRR546165.213381 
InterProScan Domain  
Gene Ontology  
KEGG Orthology
EC
Transcription Factor Family
Transporter Classification Family
Probeset
Corresponding NCBI Gene 836181 
Trichome-related Gene from Literature 836181