Detail of EST/Unigene TCHL53990
Acc. TCHL53990
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana E-value=0; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica E-value=0; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) E-value=0; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Cyanothece sp. (strain ATCC 51142) E-value=0; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) E-value=0;
Length 1796 nt
Species Humulus lupulus
Belonged EST Libraries SRR546165 (92 ESTs); SRR546168 (43 ESTs); SRR546170 (33 ESTs); HL_TRI (31 ESTs); SRR546172 (29 ESTs); HLUTR2CH (9 ESTs); HLUTR3CH (4 ESTs); HLUPJN1 (3 ESTs); HLUPLC (2 ESTs);
Sequence TCCTCGTTGGGGATAAAATGCGCACAACCATTACAAGCACCCCTGACTAGTTTCTCTCCA
CAATCTCTGCTATTGTGCGCACTCCTTCCTACTCCCATGTCGATCACTTTCCACCTCTGC
CGGATCCCAACCCGTACCGACCTCGCCTTGCCGGAGGCCCTCTCCAGAACCGGACCCTTC
CGCTGCCGAAAACCTTTCGTTGTCCGATGCTCCGGCGAGTCATCTTCCACGGCAGGAGAT
TCCGACTTCGATGCGAAAGTGTTCCGCAAGAACTTGGTTCGAAGCAAGAACTACAATCGG
AAAGGTTTTGGCCATAAGGAAGAGACTCTTCAGCTCATGAACAGCGAGTACACCAGTGAT
ATTATAAAGACTTTGAAGGATAACGGGAACGAGTATAGCTGGGGGAACGTGACTGTGAAA
TTGGCCGAAGCTTATGGGTTTTGCTGGGGTGTGGAGCGAGCTGTCCAGATTGCTTACGAA
GCAAGAAAACAGTTCCCCGAAGAAAAAATTTGGATTACAAACGAAATCATTCACAATCCC
ACAGTCAACAAGAGGCTAGAGGAAATGAAAGTAGAAAACATTCCGATTGGTGAAGGGAGG
AAACAATTCGAGATTGTAAACGAGGGTGATGTTGTGATATTGCCTGCGTTTGGTGCTGGA
GTGGATGAGATGTTGGCTTTGAGTGATAGGAATGTTCAAATTGTTGATACCACATGTCCA
TGGGTTTCCAAGGTTTGGAATACAGTCGAGAAACATAAGAAGGCCGAATACACTTCCATT
ATTCATGGTAAATATGCTCATGAGGAGACTATTGCAACTGCATCTTTTGCTGGAACTTAC
ATTATTGTAAAGAACATGAAAGAGGCAGTGTATGTGTGTGATTACATTCTCGGCGGTCAA
CTGGATGGATCTAGCTCAACTAGAGAGGAGTTTATGGAGAAATTTAAGAATGCTGTTTCT
AAGGGATTCGATCCTGACGAACATCTTGTGAAGGTTGGTATTGCGAATCAGACCACAATG
CTCAAGGGGGAAACCGAAGAGATTGGGAAACTGGTTGAGAGGGCTATGATGCAAAAGTAT
GGAGTGGAAAACATTAATGAACACTTCCAAAGCTTTAACACAATTTGCGATGCGACCCAA
GAGCGTCAAGATGCAATGTACAAGTTGGTGGAGGAACCTATTGATCTTATGTTAGTTGTT
GGAGGATGGAACTCGAGTAACACCTCTCATCTACAAGAGATTGCAGAGGAACGTGGTATT
CCCTCATATTGGATCGACAGTGAACAGAGAATAGGTCCTGGAAACAAAATAGCCTACAAG
CTAAATCATGGAGAGTTGGTTGAGAAAGAGAACTGGTTACCAGAGGGTCCCATCACGATT
GGTGTAACATCAGGTGCTTCTACTCCAGATAAGGTTGTTGAAGATGTTCTCATCAAGGTG
TTTGACCTTAAACGCGAAGAAGCTTTGCAACTTGCTTAGTTTAAGTTAGACTCAATGTTT
GTACATCACCAGACAGCGCTATCATATAGCATTATTATTGTATTTCTAGGATGAAATGTT
GGGTCCTTGTTATGCAAGAGCTCCATGTATCTAAGAATATTAATCGTCGTATAGTAGTAG
AAATCACGTTGTTATTATTGAAAGTGATCTAATAAGTTCTTTGAATCTAGATAGCAGCCA
TAGCCTGCAATAATGCGTTTAATTGCTGACACAATAATGATATTCCACCATTTAAAAGTG
TCCGTAAAGGAAAGAAACGTTTCATTTACGAAGAATAATATACTGTATTCAAGTCG
EST members of Unigene ES657862  SRR546168.133607  ES658600  SRR546168.123486  EX521001  SRR546168.4322  ES657158  SRR546165.244899  SRR546165.267883  SRR546172.41662  ES655571  SRR546172.42824  SRR546172.34252  SRR546165.262028  ES656398  SRR546165.111315  SRR546165.22152  GD246002  SRR546168.127411  SRR546165.325562  SRR546165.57584  SRR546172.39362  SRR546168.135974  SRR546170.77802  SRR546172.77518  EX517168  SRR546168.26534  SRR546165.315019  SRR546168.109079  SRR546165.11244  SRR546168.49080  SRR546165.248389  ES657798  EX520820  SRR546165.15056  SRR546168.110194  SRR546165.88676  SRR546172.127694  SRR546168.101234  SRR546168.79036  SRR546170.76167  SRR546168.127327  SRR546168.27236  SRR546165.166564  SRR546170.34881  ES657087  GD248569  SRR546170.90600  SRR546168.89962  GD248150  ES656318  SRR546170.73854  SRR546168.7791  SRR546170.136146  ES657409  SRR546168.23753  SRR546168.15961  SRR546170.126800  SRR546172.166253  SRR546165.287710  SRR546168.124201  SRR546165.49031  GD251052  SRR546172.96312  SRR546165.98177  SRR546165.107520  ES658100  ES656388  SRR546165.105179  SRR546165.222038  SRR546172.109936  SRR546170.19855  SRR546165.171392  SRR546165.173727  EX518233  SRR546165.115687  SRR546165.87669  SRR546172.49575  GD248696  SRR546172.148120  SRR546165.2349  SRR546168.68307  SRR546170.144097  EX516491  SRR546172.37896  SRR546170.74782  SRR546165.176859  SRR546168.17286  SRR546165.37820  SRR546168.32084  SRR546165.97794  SRR546168.7142  SRR546168.61658  SRR546165.186960  SRR546168.44105  SRR546168.102517  SRR546165.298326  SRR546165.268342  SRR546165.21395  SRR546170.16691  SRR546165.218088  GD243499  ES655702  SRR546172.74432  GD250406  SRR546172.5088  ES656103  SRR546165.46331  SRR546165.28805  SRR546168.120067  SRR546172.58116  SRR546165.130092  SRR546168.128242  GD247778  SRR546170.109791  SRR546168.1273  SRR546165.105926  ES657293  SRR546172.2776  SRR546170.49035  SRR546168.28532  SRR546172.26547  ES657970  SRR546172.143548  SRR546168.38790  SRR546165.41407  SRR546168.54366  SRR546170.155474  SRR546168.2568  SRR546165.323000  SRR546170.110292  SRR546172.143900  ES657514  SRR546165.246659  SRR546165.63196  SRR546168.39164  SRR546165.181216  SRR546165.231094  SRR546170.25023  SRR546170.104873  SRR546170.107597  SRR546172.15013  GD248438  ES656049  SRR546172.142758  SRR546170.21914  SRR546165.27783  SRR546165.176959  SRR546168.73849  SRR546168.130709  SRR546165.242784  EX520418  SRR546165.129803  SRR546165.180045  SRR546165.263010  SRR546168.42632  SRR546165.263370  SRR546168.4077  SRR546170.31588  SRR546165.176109  SRR546172.103356  EX518343  SRR546170.4324  SRR546165.285169  SRR546165.26146  GD250107  ES654129  SRR546165.217388  SRR546170.156598  SRR546168.51593  GD248404  ES655974  SRR546165.147713  SRR546165.123556  SRR546165.159785  SRR546170.153885  ES658199  SRR546172.118181  SRR546170.128953  SRR546165.107964  SRR546165.116529  SRR546165.266104  SRR546165.113801  ES658142  SRR546165.117765  SRR546165.23999  SRR546165.298570  ES656193  SRR546172.62226  SRR546170.58611  SRR546165.70711  SRR546170.91704  GD248705  SRR546172.136218  GD249650  SRR546165.80835  SRR546170.91696  GD245907  SRR546170.89745  SRR546165.41514  SRR546165.183675  SRR546170.38774  GD244453  SRR546168.16709  SRR546170.4884  GD248734  SRR546170.128323  SRR546172.112094  SRR546165.313376  SRR546165.36459  SRR546165.317271  SRR546165.112399  SRR546165.150961  GD244437  EX517737  SRR546165.130286  SRR546165.86617  SRR546165.41846  SRR546165.30162  SRR546165.186731  SRR546168.47404  SRR546165.34057  SRR546170.143830  SRR546168.100748  GD247216  SRR546168.24418  SRR546165.144269  SRR546165.81947  SRR546165.16117  SRR546172.6450  SRR546172.153311  ES655301  SRR546165.67965  SRR546165.73030  SRR546165.282186  SRR546165.30575  SRR546165.306329  SRR546165.125216  SRR546168.96884  SRR546172.142421  SRR546165.201543  SRR546170.76873  SRR546165.56270  SRR546165.228043  SRR546165.21608  SRR546165.286076 
InterProScan Domain  
Gene Ontology  
KEGG Orthology
EC
Transcription Factor Family
Transporter Classification Family
Probeset
Corresponding NCBI Gene 829585 
Trichome-related Gene from Literature 829585