| Acc. |
TCMT42460 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana E-value=0; Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana E-value=0; |
| Length |
1435 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_CDS (3 ESTs); MtBA (2 ESTs); MT_Drought (2 ESTs); MtBC_GLOMUS (2 ESTs); MtBB_NOD (2 ESTs); MT_DSTEM2 (2 ESTs); MT_JCVI-MT1 (2 ESTs); MT_ECELL (1 ESTs); MT_FLOSEED_MTY (1 ESTs); |
| Sequence |
TCTGTCTTGTTGTTGCACAGAGAAGAGAGAGAAAGAGAAAAACAGAGAGACAACGAAGAA
AAGAACCTGTTCTGTTCTGTTCTTCCCCGGAACAGAGTTTGGTTTTTTCGGTGTTTGGTT
TCTCTCTCTTTCCATCTTCTTCTATTTTCTCGTTTTAAATTTTCCTGGGAAAATAAGGGA
GACAATTGGGGGAAGAAAATTTTGAGAAAAAGGGGAATACCCAGATAATTAATTTGGTGA
AATTTGCGATTTTGATTAGTGGGTTGTTTTTGTTTTAGCGGTTTGGTGAGAGTTGATGGA
GTTGGATAGCATTGAGTGTGTGTCATCTTCTGATGGTATGGATGAAGATGAGATCCATTC
ACATCATCATCATCACTCTGAATTTTCTTCCACAAAGGCTAGAAATGGAGGTGCAAATAT
CAATAATATTTTGGGTCCTACCGCCATTGCTCCTGCAACTAGTGTTCATGAATTGCTTGA
ATGTCCTGTTTGTACTAATTCAATGTACCCTCCTATTCACCAGTGTCACAATGGCCACAC
ACTATGTTCCACATGCAAAACACGAGTGCATAACCGATGTCCGACTTGTAGACAAGAGCT
TGGAGATATCAGGTGTCTAGCACTGGAGAAGGTGGCTGAATCACTTGAGTTACCGTGCAA
GTACTACTCCCTCGGATGTCCAGAAATATTTCCATACTACAGCAAGCTTAAGCATGAGAC
AGAATGTAATTTTAGACCTTATAGTTGTCCTTATGCTGGATCAGAGTGTTCCACAGTTGG
AGATATTTCCTTCCTCGTTGCTCATTTGACGGATGATCATAAGTGGACATGCACACCGGA
TGCACATTCACCATCGTTATGTGAAGTCAAATCCCCGTGAAGTAGAGAATGCAACCTGGA
TGCTCACAGTATTTCATTGTTTTGGCCAATATTTCTGCCTTCATTTCGAAGCTTTTCAGC
TTGGCATGGCCCCTGTTTACATGGCATTCCTTCGGTTTATGGGCGACGAAAATGATGCCC
GGAACTACAGCTATAGCCTGGAAGTTGGGGCCAATGGCAGGAAACTAATTTGGGAAGGTA
CACCACGAAGTGTTCGAGATAGCCACCGTAAAGTTCGGGATAGCCATGATGGTCTCATCA
TTCAAAGAAATATGGCACTATTTTTCTCTGGTGGGGATAGGAAGGAGTTGAAACTTAGAG
TCACCGGAAGAATATGGAAGGAACAGAATCAAGATGCTGCAGTGTGCATACCTAATCTAT
GTAGCTGACATGTTATTTGCGGATCATTTTTTATTGTTTGTGTATTTGATGGACTCTTTT
AAGTTTAATTACACCAACTTTGTGCTTGTTGTAATAGATTAACGCACTAAATGGCATTTT
ATTTTTCAGTTTTCTTGAGCTGTTTAATAAACAAAATTCTTCTTTCAAAACACTG
|
| EST members of Unigene |
BT052070 BT052069 EU189948 AL388038 AL388037 AL373733 AL373732 AW693291 AW689457 BF650310 EV260230 EV257935 DW016481 AL370539 AL370538 BE248734 BF635510
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K04506 E3 ubiquitin-protein ligase SIAH1;
Environmental Information Processing > Signal Transduction > ko04310 Wnt signaling pathway > K04506 E3 ubiquitin-protein ligase SIAH1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.38358.1.S1_s_at
|
| Corresponding NCBI Gene |
828901
|
| Trichome-related Gene from Literature |
N/A
|