| Acc. |
TCMT43683 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
ATP-dependent RNA helicase DDX42 OS=Mus musculus E-value=1e-16; ATP-dependent RNA helicase DDX42 OS=Homo sapiens E-value=1e-16; ATP-dependent RNA helicase DDX42 OS=Xenopus laevis E-value=6e-16; ATP-dependent RNA helicase DDX42 OS=Pongo abelii E-value=3e-15; ATP-dependent RNA helicase DDX42 OS=Gallus gallus E-value=4e-15; |
| Length |
1917 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_GESD (4 ESTs); MT_NOD_ROOT (2 ESTs); MT_DSTEM2 (2 ESTs); MT_NOD_GVN (1 ESTs); MT_DFLOWER (1 ESTs); MT_DLEAF (1 ESTs); GLSD (1 ESTs); MT_Drought (1 ESTs); MT_JCVI-MT3 (1 ESTs); MT_GSEED (1 ESTs); |
| Sequence |
CACAAACCAAAACCTCAAGCAGCAGCAATGGCGAAGGGTGACGATTCTGTACTGAAAAAA
CATAACAAAAAGCTCAGGAAAAAACAAAACAGCAAGAATTCCGTCTCTGCTAAGATTGCC
GCTGTTATCGCCTCCAAGAAGCGCCGCAAGGCCGGAAAACGCCGCATCTGCGAGGGAATG
TGCTTTAGCTTACCTTCTCTAGATGATCCATTCAATGATAGACAAGGGAAACCGGAATTT
AAAAAGAAGGATCCTAAAAAGAAAACATCTTCCCAAAAAGAGAAGACAACTCCGGTTAAA
GGGAAGAGTGTACCCGGGGAGAAAGGCACCGCAGTTGGTAGGAATGGCGCAAACAATAAA
AGTGAGATGGTGGAAGTTTGCTGCGGTGAACAGCATGATAATGAAGTTTCAGACTTCCCT
TCCAAATTTGTTTTTTGGTGTCTGAGTGCAATTGAAAACGCACTCAGACATGACGATGCT
TACACGGATGGAGAGGGAAACTCTTTCTTTCTTAACCCATGGGGATTAGAATTTTCAAAG
CATTTTTCTACTGGTAAAGATCTGATTGACACCGGTGGAACCTTTGCTACTACTGAGCAA
ATTGCATGGATGGTTTCCGCGGCAGCTGATATTTTTGTTAGAAAAGAGAAACAAGGCTTA
TCATTAGACACCCCCTTTCTTTTGTTCCTCGTCCCTTCCGAAAAAAAAGCTGGCCAGGTC
CGAACAGTTTGCAAGCCTTTGAAATCTGTAGGAATACATACAGTGAGTGTTCATCCGGGT
GCTTCCTTAGATCATCAGATTCAAGGTCTGAAAAGTTGTGAGCCTGAATTTCTCATTTCT
ACTCCTGAGAGGCTCTTGGAGCTTGTTTCATTGAAGGCAATTGATATTTCTGGCATCTCT
ATGCTGGTTATTGATGGGTTCGATGCTATTTGTAAAGCTGGCCACGCTGATGCAATAAAA
TCCATCAAGAAGTTTATTTCTGGAAATCCTAGTCTTGTGGTTTTCAATGATAGCTTCAAC
CATACATCTATCCCAGTGGTTCGGCATCTTCTGACGGGACCTATTTGTAGAATATCTATC
AATAATTCAATTGCTAGCCTAAGTTCGTGCATTGTACAGTCTGTTCAAGTGTGTACATCA
GACGAAGATAAACTTGTTAAGAGCATTGAAGTCCTGCGTCAATTTCGGAGCAGCCAGACT
CATAGTTCAAACCTTCTATATATTTTGAGGAAGGATGTCAAGTGCCATAAATTGGTGAAG
ACTCTCAAATCCATGGGTTGTTCCACGTCACTCGATTCTGATGCAGCAACTATAAATGAT
AGTGTGGATTCAAACAGGAGACTGGTTACAATGATTGATTTGGAGGATATCTCTACTTTG
GATATAGGGATGTATGATGTAATAGTCCTACCTAGTCTTGTACCCTCTATGGACACTTAC
GAGCATATTTTGACAAACATGGCCCGTCAAAGTGTCAATGGTATTTTGCATGGTTTCTTA
ACAAAAAGCGATACAGAACATGCTGGACCACTCATCTCAATTCTTGAACAATGTGGGCAG
GAAGTGCCCGAGACCTTGAAAGATCTTCATCAGGCATCAAACATATGTCGGAAGATTGAA
AGTTGAAGATTCGTTATCATTGTTTTTCTTGTGTGCATCCCATATTTGCTGCTCTTGTGA
GTTGTGATCAATTCCATGTTTGGAACTAGGGTTTGGATCTTTGAATGGGAGGATGATTTG
GTGTGCTAATTGGATTTCAGAAACATTGCATCCCCATAAAGACTCCCTTTCAGAAAATTT
TGTAATACTGTCTTCGTTTAGAATATTTCTTGTAGCCGAATGAAGGACAGTAGAATTTGG
CTACAAAAGTTACGTCAAATTTTAGCTTTTAATGCATTTCTATTTTCCTTATGTGAC
|
| EST members of Unigene |
CX541040 BE325189 AW695074 BG580114 BG448579 AW686031 CA918383 CA918382 CA918381 CA918380 BQ149105 BG453742 CA858436 BF633216 EY478000
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
3.6.1.- |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.8910.1.S1_at
|
| Corresponding NCBI Gene |
817408
|
| Trichome-related Gene from Literature |
N/A
|