| Acc. |
TCMT43897 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana E-value=0; Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana E-value=0; |
| Length |
1488 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT1 (3 ESTs); MT_DFLOWER (2 ESTs); MT_CDS (2 ESTs); MT_DSIL (1 ESTs); MT_JAS_ROOR (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_DROOT (1 ESTs); |
| Sequence |
CTTTTACATAATGATGTTCTGTTCATCAAAATCCACTTTTTTTATCGACCCATGATTACA
ATCTTCATCTTCCTTCTCTTATTTTCCTTTTCTTCTTCATAAAATTTTTCCCAGAAAAAA
ATACGAAGGAAAAAGAAGAAAATTGAAGAGAGAGGGAGAGAAATACCTAGATAAAAAAAC
TTCGAAATTTTCGATTTTGAAATCTGGGTATTTCTTAATTTTTGATTTTGAAATCTGGGT
ATGTTCTAGTTTTTTATTTGGTTGATTATTTTTGGTTATAATGGATTTGGATAGTATTGA
GTGTGTTTCATCTTCTGATGGAATGGATGAAGATGAGATCCAACATCGTATTCTTCATCC
ACATCATCAACAACATCATCATCACTCTGAGTTTTCTTCATTAAAACCTCGTAGTGGAGG
AAACAATAATCATGGTGTTATTGGTTCTACTGCTATTGCTCCTGCTACAAGTGTTCATGA
GTTGTTGGAATGTCCTGTTTGTACCAATTCAATGTATCCTCCAATTCATCAGTGCCACAA
CGGTCACACATTGTGTTCCACATGTAAAACAAGGGTGCACAATCGATGTCCGACCTGTAG
ACAAGAGCTTGGAGATATTAGGTGTCTGGCACTGGAAAAGGTTGCTGAATCACTCGAGTT
ACCATGCAAATACTACTCTCTTGGATGTCCAGAAATCTTTCCATACTACAGCAAGCTGAA
GCATGAGACAATATGCAATTTTAGACCATACACTTGTCCTTATGCTGGATCAGAGTGCTC
TGCTGTTGGCGATATTAATTTCCTTGTTGCACATTTGAGGGACGATCATAAGGTGGACAT
GCACACAGGATGCACATTCAACCATCGTTATGTGAAGTCAAATCCGCGTGAAGTAGAGAA
TGCTACTTGGATGCTCACTGTATTTCATTGTTTTGGCCAATACTTCTGCCTTCACTTTGA
AGCTTTCCAGCTAGGCATGGCTCCGGTTTACATGGCATTCCTTCGTTTCATGGGAGACGA
GAACGAGGCTCGGAACTATACCTATAGCCTCGAGGTTGGAGCAAATGGAAGAAAACTCAT
TTGGGAGGGTACACCACGGAGTATTCGTGATAGCCACCGTAAAGTTCGAGATAGTCACGA
CGGCCTCATAATTCAACGAAATATGGCCCTATTTTTCTCTGGTGGTGATAGGAAGGAACT
GAAATTAAGAGTCACAGGAAGAATATGGAAAGAACAACAGAATCCAGATGGTGGGGTGTG
TATACCAAATCTTTGCAGCTGATGTGACTTTTGTTGTTATCTGTGTGTGCTGTATATCTA
CATTACACTACACCAACTTTGTGTATGTTGTAATAGAGTAAGACACCAAGATGATGGCTT
TGAAATTTTCAGTTTTTGTTAAAGTTGTGTAATAAACAAGATTTGGAACTGGGATTTGTC
TCAAAATTTTTATTATGGGATTAAAGAAAAAAAAAAAAAAAAAAAAAA
|
| EST members of Unigene |
BT052037 EU189945 CA922708 BE320298 EV259439 EV258332 EV257371 BI272874 BI272510 BG604192 CX532709
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K04506 E3 ubiquitin-protein ligase SIAH1;
Environmental Information Processing > Signal Transduction > ko04310 Wnt signaling pathway > K04506 E3 ubiquitin-protein ligase SIAH1 |
| EC |
6.3.2.- 6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Msa.1531.1.S1_at, Mtr.52123.1.S1_at
|
| Corresponding NCBI Gene |
825352
|
| Trichome-related Gene from Literature |
N/A
|