| Acc. |
TCMT50436 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana E-value=0; Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens E-value=2e-73; Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=7e-56; Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=7e-55; |
| Length |
1412 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBC_GLOMUS (2 ESTs); MtBB_NOD (2 ESTs); MT_JAS_ROOR (1 ESTs); MT_NOD_NOLLY (1 ESTs); MT_DSLC (1 ESTs); GLSD (1 ESTs); |
| Sequence |
TCTTGGACCAACTTTGGAATTTTATACCTTGGTGTGTCAGGAGTTACAGAAGTCTGGTTC
GGGCATGTGGAGAGAGGATGCTTCTTCATACACCATAAAGACAAACTTGCAGGCTGAGGA
AACAGGAATCCATTCTCTTTATGGACTCTTTCCTCGTCCATGGTTGTCAACACAAGATAC
ATCTGGTGGCATACAGTTCTCTGAAGTAACAAATAAATTTTTCCTTTTAGGTCAAGTTGT
TGCTAAAGCACTTCAAGATGGAAGGGTCTTAGATCTCCACTTTTCTAAAGCATTCTATAA
ACTTATTCTTGGAAAGGAACTTTATCTTTACGACATACAGTCACTTGATCCTGAGCTTGG
TAGGGTACTGCATGAGTTTCAAGCACTAGTTAACAGGAAATTTTGTTTGGAATCGGTCTG
TGAAGGGAATTCTGAGTTGGAACAGGGACTAAGCTTTAGAGATTCCAGAATTGAGGATCT
TTGTCTTGATTTTACTCTTCCTGGGTATCCTGATATTGTTCTTGCTTCAGGGTCTGATCA
CACCATGGTAAATATGAGAAACCTGGAGGATTATGTTTCACTTATTGTTGATGCAACTGT
CAAGTCTGGAATTTCAAGACAGGTGGAAGCCTTCAAATCCGGCTTTAACCAGGTTTTTCC
CATTGAAAATCTTCAGATTTTCTACGAAGAAGAACTTGAGCGTATTCTTTGCGGAGAGGA
TGATTCTTGGGCTATCAATGAGCTCGCAGATCACATTAAGTTCGATCATGGTTACACAGC
TAGCAGTCCTCCCATTGTTAATTTGTTGGAAATTATCCGAGAGTTTGACCATGGCCAACG
ACGAGCATTCCTCCAGTTCGTGACCGGCACACCTCGGCTTCCTCCAGGAGGATTGGCATC
TCTCAATCCGAAGTTGACTATTGTCCGAAAGCATTGTAGTAACCAAGCAGACACAGACCT
ACCTAGTGTGATGACTTGTGCAAATTACCTTAAGCTACCTCCGTATTCGTCAAAAGAAAG
GATGAAAGAGAAGCTCTTGTATGCCATAACAGAGGGTCAAGGATCTTTCCACCTTTCATG
ACTTCATTCTCTTGACTGAATCAGCTTATTTGGATTTTGAAGGTGTAATTATTAGGGTGA
TTGGTAGCAATGTAGATAAGGGTATTTAACTAGTTGCTAGCAGTGCTGATCACAGCAAGT
TACTTTCTTGGGGACAAAGCTTTCTGTCTTCACTGACTACAATTGTTGGGGGGTGTATAT
AGCCTGCTGAATGCTGATGGTTAGCTGTTTTTTGGATTGTGTCCGCTGTATAGAAACAAA
CGGAGTGCAATTTAATTAGTCATGCTTTTTGATATTTTTTGTACAGTATTTAGTATTGGG
ACCTTAATGATTAATAGCCGTTTACCTGGTAA
|
| EST members of Unigene |
DY615646 AL389412 AL389411 AL381222 AL381221 BF005173 BQ124063 CX533583
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10590 E3 ubiquitin-protein ligase TRIP12 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
Mtr.41081.1.S1_at
|
| Corresponding NCBI Gene |
831758
|
| Trichome-related Gene from Literature |
831758
|