| Acc. |
TCMT53366 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana E-value=0; Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana E-value=4e-56; Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba E-value=8e-56; Geranylgeranyl pyrophosphate synthase 7, chloroplastic OS=Arabidopsis thaliana E-value=2e-55; Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Catharanthus roseus E-value=1e-53; |
| Length |
1989 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBC_GLOMUS (2 ESTs); MT_GESD (2 ESTs); MT_NOD_NOLLY (1 ESTs); MT_Shoots (1 ESTs); MT_DSTEM2 (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MT_DLEAF (1 ESTs); MT_JAS_ROOR (1 ESTs); |
| Sequence |
CTTCATTGTATTTTCTTCTCACGGTGTTTTATATAATTCAATCATTGTTTTCCCCATTTA
ATTCTCATCACTAATTTGTGCAATTTCCAATTTTGGGGTGGTGGGTGTTTAATTATTTGA
ATCTAGTTGAAAATGGTTTCTCTTTAACATGATTCTATGTTGCTGAAATGTTGCAGTTCT
TAGTGAATTGGTGTTTGTTTGTGTCTGAATTTAGAAACACCAAATCCCTTTTGTTAGATA
TGATTTGTTTTTTCATGCCCACTAATTGTTTGATGAAATGCATGTCTTTAATTTGAATGA
ATACTGAAGTTACAAATTGCATTATGTGATTTACTACTTTGAAATGATCAATTATTAGTA
GGGATTGCATTAGATATTGTTTAAATGATTTACTATGCAATCTGAATGCATTTGATAACT
TTTTTTTTTTCCCTTCTTATAGAGTTAGAATGGCTCCTTTTACAATTGCGACAATGCCCT
CTTTAAACATCGGGCGTTTCCAAAAGTCTCCGAATCGTATCCTTCCAATTCGCTGCTCCA
TGGCTGCTCCTTCTCCTTCTTCGGTTTCCATCCGATCAAAAGCTGTTCACTTTGATTTGA
AGACATATTGGACTTCTCTAATGACGCAGATCAATCAGAAGCTTGATGAAGCCATTGAAG
TTCAGTTCCCTCAACAGATATATGAAGCTATGAGGTATTCTGCCCTTGCTAAAGGTGCTA
AGCGATCCCCCCCTGTTATGTGTATATCTGCTTGCGAACTCTTCGGGGGCAGTCGCCTTG
CTGCCTTCCCCACTGCATGTGCCCTTGAAATGGTTCATGCCGCTTCATTGATACATGATG
ATCTTCCCTGCATGGATGACTCCTTGTCACGCCGTGGCCAGCCCTCAAACCACACCATCT
ATGGTGTTGACATGGCAATTCTGGCGGGTGATGCACTCTTTCCCCTTGGATTTCAACACA
TTGTTTCACATACTCCCTCTGACCTTGTACCTGAGCCCCGTGTACTTCGTGTCATTGCTG
AGATAGCCCGCTGTGTGGGTTCCACTGGAATGGCTGCAGGGCAGTTCTTGGACCTTAAAG
GGGGCCCAAATGCAGTTGGATTGATACAAGATAAAAAGTTTGGTGAAATGGCGGAGTGTT
CTGCAGTGTGTGGAGGGTTGTTGGCCGGTGCCGAAGATGATGAGATAGAGAGACTGAGGA
GGTATGGTAGAGCTGTTGGAGTATTGTATGCTATTGTAGATGATATTTTGGAAGAGAGAC
TGAAACCTGAGGGAGATAAAGACAGGGAAAACAGCGGGAAGAGTTATGTAGAGGTTTATG
GGGTTGAAAAAGCAGCAGAGGTAGCTGAAGAACTTAGAGCAAAGGCTTTGGAGGAATTGG
ATGGATTTGAGAAGTATGGAGATCAAGTGTTGCCCCTCTACAGTTTTGTGAATTATGCTA
TTGATAGAAGTTTCAATGTTGACGAGGCCAGTAGATGATGGGTTCTTGAAAGTCAACCAC
TTATAGTTCTTGGTCGAGCAGTGAGTTTGGCGAAATCATGGTGGCGTCGTGATTTTGTTG
ATGCTTCAAAGTGTAGTTTTTGTCAAAATCGCGGCGTCCCACTCTGATTATGACAATTTC
TGCGCAAATACAAACATGCACTTATTTGAGTCCTTATGAAACGATTATTGCATTTTAGAA
ATTTAGAGCTATAAAAAATATAATTGGGGTTAATTAAGAGAGTAAGGTCTGAACTGTTTT
AGACTGTGAATCAATCTAAAGCGGTCCGATTCAAACAGTATTTAGAGGTGGGACAGTAAT
GGATACCAAAGAGGACTCGTCCTATGCTCTAGTCTTTACGAGAAGATAAGTTTTTATCTG
TCTTATAAAAAGAGTAAGCTATTGCTGCTTTTTTTTTTCTCCTTTTTTTTAAGTTTTTAT
CTGTCTTTTAAAAAGACTAATTTTGAACCGCAAGTATTTTAATATTTTGATCGGATGAGT
TTTTGTCTC
|
| EST members of Unigene |
DY617772 AL387260 AL387259 CX525059 AW689656 DW015154 CA990285 BI310915 BE249711 CX533921
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
2.5.1.- |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.11514.1.S1_at, Mtr.35649.1.S1_at
|
| Corresponding NCBI Gene |
830002
|
| Trichome-related Gene from Literature |
N/A
|