| Acc. |
TCMT56827 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana E-value=3e-89; DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana E-value=3e-89; DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica E-value=2e-82; DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp. japonica E-value=1e-67; Pre-mRNA-processing ATP-dependent RNA helicase prp11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=2e-60; |
| Length |
1427 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DSTEM2 (1 ESTs); MT_DFLOWER (1 ESTs); MT_GPOD (1 ESTs); MT_JAS_ROOR (1 ESTs); MtBA (1 ESTs); MtBB_NOD (1 ESTs); MT_Shoots (1 ESTs); |
| Sequence |
GAATCCACAATATCTGATTTTAAAAGCAATGTCTGCAATTTGCTGGTTGCGACAAGTATT
GCTGCCAGGGGATTGGACGTTAAGGAGCTCGAATTGGTGATCAATTTTGATGTTCCAAAC
CACTATGAAGATTATGTACATCGTGTTGGGCGTACTGGCCGTGCTGGCCGAAAGGGTTGC
GCTATCACATTTATTTCTGAGGAAGATGCAAGATATGCACCAGATCTGGTGAAAGCTTTG
GAGCTATCTGAGCAGATTGTTCCTGATGATCTGAAATCCCTTGCCGAGGGCTTTATGGCG
AAAGTGACTCAAGGACTGGAGCAAGCCCATGGGACTGGTTATGGAGGCACTGGGTTTAAA
TTTAATGAAGAGGAAGATGAGGTGAGGAGAGCAGCGAAGAAAGCCCAAGCCAAAGAATAT
GGATTTGAAGAAGACAAGTCAGATTCAGAAGATGAAGATGAAGGTATTAGGAAGGCAGGA
GGTGATATCTCACAGCACCATACTCCGATCTCTGCAGCCCAACTGATTCCAATTGGTGGG
ATACCATCTGTTTCAACAGTCTTGCCTGTGATAGGATCTATTGCTACAAACGATGGGGCT
ACTCGAGCAGCATTAGCTGCTATGAACCTGCAGCAAAACATAGCAAAAATACAATCTGAA
GCATTGCCAGAGCATTATGAGGCTGAGTTGGAAATAAATGATTTCCCTTCAGAATGCTCG
TTGGAAAGTCACACACAAGGAAACTTTGGGCCCCATTTCTGAGTGGACTGGAGCTGCTAT
TACTACAAGGGGGCAGTTTTTCCCACCTGGCAAAGTCGCAGGGCCTGGGGATCGCAAACT
CTACTTGTTCATTGAGGGTCCTAGTGAACAGTCTGTTAAGAGAGCCAAAGCAGAATTGAA
ACGAGTTTTGGAAGATATCACTCATCAGGCTTTGCAACTACCTGGTGGAACTCAACCTGG
CAAATACTCTGTTGTATAAAAGGCTAGGTGGTCTTTCAAGCTTAATCTCGTATATTCAAA
TATTGTTCCATCCTTGCACTTGCTTCGTGGATGTCTAAGGTTTTGGTTCGATGATCATTT
GTCTTGAAAAGGGATGCAAGCTGTGATTGGGGAGATCACTCGATTCAGTTATTTATGTAT
TTTCCTAACTGCCATGATTTGGATTTCAGCACGTGTAACGTAAAACATATCTTCATATTA
ATTTTACCACTTAATGGATATGTTTATCATGGCAAATCATCAGTTTAGACTCATAAGTCA
TGGCACTTGTAAGATCACTGGCTTTGCACTTTCCCTTGTTTTTTTTTGAACTCACAATTC
TATTTTGTGCTGTAATTCCAATTCCAAAGGATGCTGTAACATTTTATTTGGTTTGCTGAA
AGTATGTTCATGAATTATTGATGAAAAATTATCACATTTATTATTGG
|
| EST members of Unigene |
AL377091 CX523724 AW695458 BQ147694 CA917430 CX530551 AL368037
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
2.7.7.- 3.6.1.- 3.6.1.3 |
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.1 ATP-binding-cassette superfamily ABC ABC-type importers (all from Bacteria and Archaea) |
| Probeset |
Mtr.41210.1.S1_at
|
| Corresponding NCBI Gene |
820119
|
| Trichome-related Gene from Literature |
N/A
|