| Acc. |
TCMT59906 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens E-value=6e-53; Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens E-value=3e-51; Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus E-value=3e-51; Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus E-value=3e-51; Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens E-value=6e-51; |
| Length |
1569 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_HOGA (3 ESTs); MT_JAS_ROOR (1 ESTs); MT_SROOT_KV1 (1 ESTs); MT_JCVI-MT3 (1 ESTs); |
| Sequence |
GCTTCACCTCCCCATGTTCTTCTTATATCTGCTGGTGCTAGCCACACTGTTGCACTTCTC
ACTGGCAATGTTGTTTGCTCTTGGGGCCGAGGAGAAGACGGACAATTAGGCCATGGTGAT
ACCGATGATCGACTCTTACCCACAAAACTAAGCGCTTTCGATGGCCAAGACATTGTATCT
GTTACTTGTGGAGCTGATTATACAGTGGCACGTTCCAAGTCCGGCAAGGATGTATATAGT
TGGGGATGGGGTGATTTTGGAAGATTAGGTCATGGTGATCCTAGTGACTTATTCATTCCT
CATCCCATTAGAGCATTACAGGGTCTAAGGATAAAGCAAATTTCCTGTGGGGACTGTCAT
TGTTTGGCAGTTACCATGGAAAACAAGGTGTTGAGTTGGGGGCGGAATCAAAATGGTGAA
CTTGGACTTGGTACCACAAAGGACTCTCACGTGCCACAAAAAATTCTAGCATTTGAGGGA
ATACGTATCAAAATGGTGGCTGCTGGTGCTGAACACAGTGTAGCAATTACCGAAGATGGG
GATTTGTATGGATGGGGTTGGGGACGATATGGAAACTTGGGATTGGGAGACACAAATGAT
CGCTTGATCCCTGAGAAAGTGAACATTGATGGTGACAAGATAGTCATGGTTTCTTGTGGC
TGGAGGCATACGATATCGATTTCATCTTCCGGTGGATTATACACACATGGATGGAGTAAA
TATGGTCAGCTTGGACATGGGGACTTTGAAGACTGTCTTGTGCCTCGCAAGGTTCAAGCA
TTGAGTGATAAGCTCATTTCTCAGGTATCAGGTGGATGGAGGCATAGTATGGCACTCACG
TCTAATGGACAACTTTTCGGCTGGGGTTGGAATAAGTTCGGACAGATTGGAATTGGTCAC
AATTTTGATTGCTCCTCTCCCATGCTAGTGAACTTTCCTCATGCTCAGAAAGTAGTTCAG
ATGTCAAGTGGATGGAGACACACGGTTGCTGTCACCGATCGTGCAAATGTATATTCTTGG
GGAAGAGGTGCAAATGGACAACTTGGGCATGGAGACACCAAAGACCGGAACGTTCCGACG
ATTATTGATGCCTTCAGTGTTGATGGATGTAGTGAGCAGCACATAGAATCCTCAAACTAT
CCATTACCAGGGAAATCATTTGCCTCCTTATCAGAGAGATATGCGGGTTGTTCCAAATGA
AACTGCTCTGGGATCATATGCCACTACTTCATCAGATAAGAGTGGATAAGTTTGATGCCA
GTGTCCCTGAGAATGATGTCTCACTTGATAGCCCAACCATTAATCAGTTCGAGACAATGA
TGTAGGAGATCAACACACACAAGGAGGAGCTAGGGATAAGTTTTCTTTTATGTGATTTTA
TAAAAGGGATAAGTCCCCCCTTCTTTGGTTCATATTTGTACATGTTTGTTTTGGTTGTGG
AATAATATCAGCCGCGCATTTAGTTCAAATTAAAGTTATAGTTTTTCTAGTTTTCTCTTT
AACCCTAAGAAAAATAAGCTTGGTAATATGAGTTTGTAGCTTCTTGTAATATAATGGTGA
GAAGACTTA
|
| EST members of Unigene |
CX528757 CB894900 CB894328 BG648331 BF003714 EY478344
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10594 E3 ubiquitin-protein ligase HERC1;
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10615 E3 ubiquitin-protein ligase HERC4 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Msa.1156.1.S1_at, Mtr.13099.1.S1_at
|
| Corresponding NCBI Gene |
836506
|
| Trichome-related Gene from Literature |
N/A
|