| Acc. |
TCSL75417 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana E-value=2e-88; E3 ubiquitin-protein ligase COP1 OS=Pisum sativum E-value=5e-87; E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens E-value=1e-20; E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus E-value=1e-20; Postreplication repair E3 ubiquitin-protein ligase RAD18 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=3e-09; |
| Length |
1315 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SL_MicroLEAF3 (4 ESTs); SL_DEF_ROOT (3 ESTs); SL_FRUIT (2 ESTs); SL_MicroFRUIT (1 ESTs); SL_FLOWER (1 ESTs); LIBEST_024426 (1 ESTs); SL_Lyc_leaf (1 ESTs); SL_PRERIP_FRUIT_TAMU (1 ESTs); SL_GFRUIT (1 ESTs); SL_maturing_fruit (1 ESTs); |
| Sequence |
CTTACGATGTGAAGATAGGAGAAAACGTGGGTACTTCAGGTTCCACATCTTCTCCAAAAA
TCTTCCCTTTTCGTGGGGTCTGTAGCTTTGTTCCTCCTCCACCACAAATCCCTTCTCCTC
CCCAAAAATAGTAATAAAGTTATAAAGCAAAAAAGGGTAGAAAAGCCCCATTTCATTTCT
TCAAGTTGACGCTTGATTCACTGATGAACAGTCAAGAACTTGTTTGGGGTTGAAGTATAG
TTGATTCTTGAAAATACCCAATTTGCAAAAACTTGTTTTGGGTTGAGGGGTAGTTGATTC
TTGAAAAATACCCAATTTGCTAAGAACTTGTTTGGGGTTGAGGGGTAGTTGATTATTGAA
AAATACCCAATTTTGCTAAAAAGTTGTTTGGGGTTGAGGGGTAGTTGATTATTGAAAAAT
ACCCAATTTGCAGTTGGGGGTATAGAGGGAGATGGTGGAAAGTTCAGTTGGAGGGGTGGT
GCCAGCAGTGAAGGGGGAGGTGATGAGGAGGATGGGGGACAAAGAGGAGGGGGGTAGTGT
AACTCTAAGGGATGAAGAAGTTGGGACAGTGACAGAATGGGAATTGGACAGGGAATTGTT
GTGTCCTATATGTATGCAGATCATAAAGGATGCATTTTTAACAGCTTGTGGGCACAGTTT
TTGCTATATGTGCATAGTTACTCATCTTCACAACAAGAGTGATTGCCCCTGTTGTTCTCA
TTATCTCACTACCAGTCAACTCTATCCCAATTTCCTACTTGACAAGCTATTGAAGAAGAC
ATCTGCCCGTCAGATTTCAAAAACTGCATCCCCTGTTGAACAGTTTCGTCATTCATTGGA
ACAGACAGGGTTCTGAAGTGTCAATTAAGGAGCTGGACGCTCTATTGTTGATGTTGTCAG
AGAAAAAGAGGAAATTGGAACAGGAGGAAGCAGAGCGAAATATGCAAATTCTGCTAGACT
TCTTACAGATGTTAAGGAAGCAAAAAGTTGATGAACTCAATGAGGTGCAACATGATCTGC
AATACATCAAAGAGGACTTAAATTCAGTAGAGAGACATAGAATAGACCTATACCGGGCTA
GGGACCGGTATTCAATGAAGCTCCGAATGTTAGCAGATGATCCTATTGGGAAAAAACCTT
GGTCTTCATCAACTGATAGGAACTTTGGTGGTCTTTTCTCCACTTCACGAAATGCACCTG
GAGGATTACCGACTGGAAACTTGACATTCAAAAAGGTGGACAGCAAAGCTCAAATAAGCT
CTCCTGGACCACAGAGAAAAGATACTTCAATCAGTGAACTGAACTCACAACATAT
|
| EST members of Unigene |
BI931080 DB695970 BP887984 BE432367 BE432365 BF097191 BF097186 BP911003 DB703871 DB682439 BF097167 FS198224 DB678443 BF052121 DB710382 AW933294
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10143 E3 ubiquitin-protein ligase RFWD2 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
817857
|
| Trichome-related Gene from Literature |
817857
|