| Acc. |
TCMT47237 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
tRNA pseudouridine synthase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) E-value=3e-52; tRNA pseudouridine synthase 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) E-value=3e-50; tRNA pseudouridine synthase 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=9e-49; tRNA pseudouridine synthase 1 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) E-value=1e-48; tRNA pseudouridine synthase 1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) E-value=2e-46; |
| Length |
1897 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBA (2 ESTs); MT_SEEDROOT_KV3 (2 ESTs); MT_HOGA (1 ESTs); MT_CDS (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_DFLOWER (1 ESTs); |
| Sequence |
CACACTCACTTCGTTTTCTCGGATGGATGCAGTTTCTTTTGTTATCGTGCGTGATTCTGA
AATGAGGGTTTAAGGTTGTTCCGACCATTGTCTCACGTTGTTGTTCTCTCTTTCGTCTGA
TCTATTTCTGCGTTACCTTCAGCTGTCGCGGAAGAGCCAGCGACCAAGAAGGTGAAGATG
TCTACCACTACTTCTGATGATGAAGGATGTACAACTGCTGAAGGAAGTAAGGTAAGATAC
AAGCGCCGTAAGGTAGCTATTTTCTTTGCTTACTGCGGTGTTGGTTATCAGGGTATGCAG
AAAAACCCTGGTGCAAAGACTATTGAAGGTGAACTAGAAGAAGCTTTGTATGTTTCTGGA
GCTGTACCTGAACAGGATCGTGGACTTTCTAAACGGTATGACTGGGCTCGGTCAGCTAGA
ACTGATAAAGGAGTTAGTGCTGTTGGTCAGGTTGTTTCGGGCCGATTCTATATTGATCCG
CCTGGCTTTGTTGACCGCCTTAATTCAAACCTTCCCTCACAGATACGAATTTTTGGTTTT
AAGCGAGTGACTGCTTCTTTTAGTGCTAAGAAGTTTTGTGATCGGAGGAGGTATGTTTAT
CTCATCCCTGTGTTTGCTCTTGATCCATGTTGTCATCGCGATAGAGAGACTGTGTTGGCT
AGTTTAGGGTCTGAAAATGAGCTTGTTAAGTGTTTGCCGTGTTCTGAGAGAGGCCGAAAA
GTGGAAGGTGTGGTTGGTAATAGTAAGCGCAATCTTGAGCTAGAAGCTGTGGATGTTGAG
AATGGTTCATCAAACAAAAATGATGTGGTTGACTCTGGAGTTACAAAGGATGTGGAGGTT
TCTTTAAGCAAAGGTGATGATAATCATTTAAATAAAGAATCCATTAATGACAATGAGGGT
AAGGTTTCAGTTGAAGAAGTAAATTCTAAAACTGTGGTTTCTGATCAGGATGAGGTTGCT
CCCATAAATGGTGGATCTGAGAATAATTTAAGCATTCTCGAGGAAGAAAAAGTGAACAGA
GAGGATACGGCTGCCAATGGAAGTGGTTTTTGTTATGGTGAGAAGGAGAGGGAAAGATTT
AACAATATTTTGAAGTGTTATGTGGGAACTCATAACTTCCATAACTTCACGACCAGAATA
AAACCCGAGGATCCTTCTGCAAAACGTTTCATTATTTCATTTGATGCAAGCACCACTGTT
GTAGTTGAGGGCATGGAATTTGTGAAGTGTGAGATTGTGGGACAGAGCTTCATGCTTCAT
CAGATACGGAAGATGATGGGGCTTGCCGTGGCAATCATGAGAAATTGTGCACCTGAGTCA
CTTATTGAGAAAGCTTTGCAGAAGGATGTTAGCATCACTGTGCCTACTGCACCTGAGGTT
GGATTATATTTAGATGAGTGCTTCTTTACTTCATATAACCAGAAGTGGAAAGATACCCAC
GAAGAGGTGTCAATGAAAGCATATGAGAAGGAGGCTGAGGATTTCAAAATGCAGTACATA
TATCCTCATATTGCTTCCACAGAATATAAGGAAGGAACTGTTGGCCTATGGTTGCATTCT
TTGAACCATAGAAACTATCCAGATCTGCGCATCCTTGACGGGGAAGGTGTCACGAATGAC
AAGAAAGTTGAAGTTGACATGAATGACAAGAAAACTGAAATTGAAGTTGTAACCGAATGA
AACTTTTTTCGTGCCGGTCATTGTAGAACTCATTCTTTTTAATTGGTTTATGCCTTCCTT
TGACATTTCAGACATATTATACTTATCTATACTGCTACGCATCATAGACAATTATATGCA
GGACATGGCCCTTTTCGTGTCTATTATTTTGTTGAGACACTTACGAAAGGGAAATGGAAG
AGTATTTTCATTACTTCATTGTGTTATTTAAATTTTC
|
| EST members of Unigene |
BT052900 CA921820 EV255861 BG646082 AW736064 BQ149769 BG648864 AL371010 AL371009
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
5.4.99.12 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.13576.1.S1_at, Mtr.9507.1.S1_at
|
| Corresponding NCBI Gene |
838625
|
| Trichome-related Gene from Literature |
N/A
|