| Acc. |
TCMT56905 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana E-value=7e-79; Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens E-value=2e-53; Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=8e-41; Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=6e-33; |
| Length |
1407 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_IROOT_DSIR (1 ESTs); MT_DSTEM2 (1 ESTs); MT_NOD_ROOT (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_DFLOWER (1 ESTs); MT_HOGA (1 ESTs); |
| Sequence |
GAAAGTTGGACTTCAAATGTGGAGGTCAGGTTCTGATCACATGGAAATTGATGGAGATGA
AAAGAAAAAGAAAAGCAGTGAAGGCAATATTGCTAGAGATGGAGAACTTGTTCAAGCTCC
TCTTGGGTTGTTTCCTCGTCCCTGGCCTGCAAATGCTGATGCGTCAGAGGGTAGCCAGCT
TTTCAAAGTGATTGAATATTTCCGGCTTTTAGGCCGCGTAGTTGCTAAAGCACTTCAGGA
TGGACGTCTATTAGATTTGCCATTATCTGTAGCATTTTATAAGCTTGTTCTTGGTCAAGA
TCTTGATTTGCACGACATTCTTTACGTTGACGCTGAACTTGGGAAAACTTTGCAAGAGTT
GAATGCCCTTGTTTGTCGGAAACATAATATTGAATCTATTGGTGGTGGTAATACTGGTAC
AGTATCAAATTTGCATTATCGTGGAGCTCCAATTGCAGATCTCTGTTTGGATTTTACCCT
TCCTGGTTATCCAGAGTATACCTTGAAACCTGGGGATGAAATTGTTGACCTCAATAATCT
AGAGGATTATATATCCATGGTTGTTGATGCCACTGTCAAGACTGGAATAACGCGCCAACT
GGAAGCCTTTAGAGCAGGGTTCAATCAGGTTTTTGACATCTCATCTTTACAAATATTTAC
GCCTCATGAATTGGATTATTTGCTTTGCGGCCGTAGAGAATTATGGAAGACAGAGACACT
AGCTGATCATATCAAAATTTGACCATGGGTACACTGCCAAGAGCCCCGCAATAGTGAATT
TACTTGAAATTATGGGAGAGTTCACACCGGAGCAGCAGCCGTGCCTTCTGTCAATTTGTT
ACTGGAGCACCTAAGCTACCACCTGGTGGGCTGGCTGTTCTAAATCCAAAATTAACGATT
GTGAGAAAGCTCTCGTCAACTGCAGCCAATACTACATCCAATGGTAACGGACCTTCAGAA
ACAGCAGATGATGACTTGCCAAGTGTGATGACTTGTGCTAATTACCTGAAGCTTCCTCCT
TATTCTACCAAGGAAATTATGCACAAGAAGCTAATGTATGCAATCAATGAAGGCCAGGGA
TCCTTTGATTTATCATGAGTTTCTTGGACTAACCAACCCGACCCTGTATGTTAATATGAT
GAATCAGGGTTTACTTCCAAGGCTTACTCTCTGGTTGGCACTTTCCCTTCTTCCTTCTCA
AATAATGGCCCCATTTAAAAAGCTCATCAAAGGTTTTGACATAGTTCAGGTTGCCGATTC
AAAACGGATCGCCACAGTTTCAAGGTGTAAAGGCATTTGCTGAGCTCGTTTAGTTGTTAC
AATATGTAAATTAAATAGGAATGTTGAGCTATTTTGCCCCCTAATTTTTTTTATCGTGCT
TTCAAGCCAAATTATTTGTAGTTCATA
|
| EST members of Unigene |
AW559553 AW691154 AW685226 AW736357 BI271541 CB894332
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10590 E3 ubiquitin-protein ligase TRIP12 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
Mtr.13122.1.S1_at, Mtr.49345.1.S1_s_at
|
| Corresponding NCBI Gene |
830017
|
| Trichome-related Gene from Literature |
830017
|