Detail of EST/Unigene TCSL78018
Acc. TCSL78018
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) 40S ribosomal protein S13 OS=Glycine max E-value=2e-76; 40S ribosomal protein S13-2 OS=Arabidopsis thaliana E-value=6e-74; 40S ribosomal protein S13-1 OS=Arabidopsis thaliana E-value=1e-73; 40S ribosomal protein S13 OS=Pisum sativum E-value=5e-73; 40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica E-value=1e-68;
Length 880 nt
Species Solanum lycopersicum
Belonged EST Libraries SRR015436 (17 ESTs); SL_TAMU (10 ESTs); SRR015435 (9 ESTs); SL_SHOOT_4WEEK (6 ESTs); SL_maturing_fruit (5 ESTs); SL_CROWNGALL (4 ESTs); SL_MicroFRUIT2 (4 ESTs); SL_RES (4 ESTs); LIBEST_024426 (4 ESTs); SL_SHOOT_8WEEK (3 ESTs); SL_cTOS (3 ESTs); SL_SUS_LEAF (3 ESTs); SL_FLOWER_DEV (3 ESTs); SL_PRERIP_FRUIT_TAMU (2 ESTs); SL_CELL_BTI (2 ESTs); SL_FLOWERBUDS3 (2 ESTs); LIBEST_024458 (1 ESTs); LIBEST_024456 (1 ESTs); SL_radicle (1 ESTs); SL_Lyc_leaf (1 ESTs); SL_GFRUIT (1 ESTs); SL_DROOT (1 ESTs); SL_germ_seedlings_TAMU (1 ESTs); SL_breaker_fruit (1 ESTs); SL_flower_buds8 (1 ESTs); SL_flowerbuds4 (1 ESTs); SL_MicroLEAF3 (1 ESTs); SL_ROOT (1 ESTs); SL_ROOT_pre-anthesis2 (1 ESTs); SL_ROOT_pre-anthesis (1 ESTs); SL_CDS (1 ESTs); SL_TAMU_CALLUS (1 ESTs); SL_DEF_ROOT (1 ESTs); SL_RIP_FRUIT_TAMU (1 ESTs);
Sequence CGGCCGGGGCTTCCGCACAACCAAAGGTAAGCCTCCATTGCAGACCACCAGTAGCCTCCG
CCATCATGGGTCGTATGCACAGTCGTGGTAAGGGTATTTCAGCTTCTGCTCTCCCTTACA
AGAGAACTCCTCCTAGTTGGCTCAAGATCTCTGCTCCAGATGTTGAGGACAACATCTGCA
AGTTCGCTAAGAAAGGATTGACCCCTTCACAGATTGGTGTGATTCTTCGTGATTCTCATG
GAATTGCACAAGTGAAGAGTGTTACTGGTAGCAAGATCTTGCGTATCCTCAAGGCACATG
GGCTTGCACCTGAGATTCCAGAGGATTTGTACCACCTGATTAAGAAGGCTGTTGCCATTA
GGAAGCATTTGGAGAGGAACAGGAAGGATAAGGATTCTAAGTTCCGTTTGATTTTGGTGG
AGAGCAGGATTCATCGCCTTGCTCGTTATTACAAGAAAACAAAAAAGCTCCCACCTGTCT
GGAAATACGAATCTACCACTGCTAGCACACTTGTGGCATAGGCTGAGACGTGAGCTGGAG
TAGCTTTGGCTGATCGCAATATGTAGTTTTCTTGTGTCATGAACTGTTTGCTATATCCAA
TTTTGTTTGATTTAATCATGCTACTCAATGGAAAATAGTTTTCTGGATAGTATTTGCTCC
TATTTTTACCAAGTGTTAAGCATAGATGCTTTTATTTAGATATTCAAATGAATGACTTGT
TTCTCAAGCTCATGGTGGTAATCTGTAATTTGGATTGCTGAAAATTGTGGTTTAATGCCT
CATCATTCTATGTTCATGGCAGTGAAGTACCACTTTTTAAACCTCCAAAAAAAAAAAACC
TCGTGCCGAATTCGGCCCAAAGGGTTGGAACACTTAAAGG
EST members of Unigene SRR015436.313831  SRR015435.242010  AI779487  SRR015435.49324  FS187356  AI489950  SRR015436.82827  BP892580  AI489170  SRR015436.228942  BG129258  BP904958  GO376022  FS201731  SRR015435.128954  BE460137  AW223518  AW932839  BG643450  BI205810  SRR015436.322398  BG128681  BP889889  BP894894  SRR015436.294818  BI423032  BI204612  AI489540  SRR015436.96549  AW621413  BG132939  FS187336  AI772431  AI486800  BG643013  BG629790  BG123819  SRR015435.311026  BG133733  BW689856  AW928730  SRR015436.42011  BP894307  SRR015436.271871  AW650629  BW690045  SRR015436.29816  AW091615  SRR015436.74128  SRR015436.104024  SRR015436.165678  AI483150  DB706408  AI483146  AI782126  BE450139  SRR015436.265060  SRR015435.174999  BG130760  SRR015435.158310  AI898144  BF114241  SRR015436.87507  SRR015436.96572  AI776690  BG126881  AI484050  SRR015436.243196  BP895813  AI772211  SRR015436.25894  AW625167  GO373442  BG629345  EG553346  AW929802  AI775602  AW934625  AI485322  AI488630  AI483945  AI778351  BG625996  BF098413  BW690093  BM536252  BI206224  SRR015435.296418  AW220865  FS189050  AI486920  SRR015435.333599  AW623234  BG134774  SRR015435.288654  BW691523  AI482684  AW040453  BT014336 
InterProScan Domain  
Gene Ontology  
KEGG Orthology Genetic Information Processing > Translation > ko03010 Ribosome > K02953 small subunit ribosomal protein S13e
EC
Transcription Factor Family
Transporter Classification Family
Probeset
Corresponding NCBI Gene 828167 
Trichome-related Gene from Literature 828167