Location:
EST Analysis
> Batch download trichome / non-trichome sequences
| Species |
Humulus lupulus |
| # of ESTs from trichome cDNA libraries |
825370 |
| # of Unigene expressed in trichomes |
106370 unigenes, composed of 90862 singletons and 15508 TCs |
| Download the above ESTs and Unigenes |
link |
| Original cDNA libraries |
5 libraries from trichome tissue and 5 libraries from non-trichome (for unigene assembly) tissues
|
Download the above sequences by original cDNA libraries:
| cDNA libraries from trichome tissue: |
| Library Acc. |
Name |
Organism |
Tissue |
Release Date |
# of EST |
# of Unigene |
Download |
|
HLUPJN1
|
HLUPJN1 |
Humulus lupulus |
|
Sep 17, 2008 |
1872 |
1153 |
link |
|
HLUPLC
|
HLUPLC |
Humulus lupulus |
Trichome (lupulin gland) |
Sep 17, 2008 |
2370 |
1312 |
link |
|
HLUTR2CH
|
HLUTR2CH |
Humulus lupulus |
|
Sep 17, 2008 |
1589 |
1130 |
link |
|
HLUTR3CH
|
HLUTR3CH |
Humulus lupulus |
Trichome (lupulin gland) |
Sep 17, 2008 |
4768 |
3576 |
link |
|
HL_TRI
|
Humulus lupulus (L. cultivar Phoenix) Trichome isolated from the female flower at mid-developmental stage |
Humulus lupulus |
Trichome isolated from the female flower |
Oct 09, 2007 |
12360 |
7185 |
link |
| cDNA libraries from non-trichome tissue: |
| Library Acc. |
Name |
Organism |
Tissue |
Release Date |
# of EST |
# of Unigene |
Download |
|
SRR546165
|
SRR546165 Hops mature cone 454 library |
Humulus lupulus |
Hops mature cone |
Aug 21, 2012 |
326354 |
43799 |
link |
|
SRR546168
|
SRR546168 Hops leaves 454 library |
Humulus lupulus |
Hops leaves |
Aug 21, 2012 |
137295 |
26495 |
link |
|
SRR546170
|
SRR546170 Hops roots 454 library |
Humulus lupulus |
Hops roots |
Aug 21, 2012 |
166934 |
37637 |
link |
|
SRR546172
|
SRR546172 Hops flowers and mature cones 454 library |
Humulus lupulus |
Hops flowers and mature cones |
Aug 21, 2012 |
171079 |
30610 |
link |
|
HL_HIF_HSS
|
HlF HSS cDNA |
Humulus lupulus |
|
Jul 19, 2005 |
574 |
616 |
link |
| full-length or partial cDNA sequences from this speices: |
| Library Acc. |
Name |
Organism |
# of EST |
# of Unigene |
Download |
| HL_CDS |
cDNAs of Humulus lupulus |
Humulus lupulus |
175 |
115 |
link |
|
