| Acc. |
TCMT42693 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Sphingoid base hydroxylase 1 OS=Arabidopsis thaliana E-value=0; Sphingoid base hydroxylase 2 OS=Arabidopsis thaliana E-value=0; Uncharacterized hydroxylase C887.15c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=9e-49; Sphingolipid C4-hydroxylase SUR2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=6e-46; Methylsterol monooxygenase 1 OS=Sus scrofa E-value=1e-16; |
| Length |
1608 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT3 (4 ESTs); MT_JCVI-MT1 (2 ESTs); MT_SEEDROOT_KV3 (2 ESTs); MT_CDS (1 ESTs); MT_DFLOWER (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_SIRRA (1 ESTs); MT_JAS_ROOR (1 ESTs); MT_HOGA (1 ESTs); MT_JCVI-MT2 (1 ESTs); |
| Sequence |
TGGGGAAAACAAAACAATTTTCAACATTCTCTCTCTTCTCTCTCTTTGGAACCTTCCTCC
TTCTGTGGAAAAACCTAATCCAATATTTAATTCGCTTCTCGTTGGTTTTGGGTTTTCTTC
AATCATTCATTCATCCAAACCTTGAAGGAACAAGGAGAGAGAAAGAAAGAATTTCAATTT
TAAGGGTTAGGGTTAAAGATTAAGTGGAGAGAGAATTTCATTTATTTTTTCTGAAATTGA
TGCAAATTTTGGGTTTTGTGGGTTATTTATAAATCAAATCAAGGAAAAAGATTTGATTTT
TTCATCTGGGTGTGTGAGAAATGATGATGGATTTGGATTTGGGGGTTTCTGATGAGATGT
TAGGGACTTTTGCTCCACTTTTAGTTTATTGGATTTATTCTGGTTTTTATGTTGTTTTGG
GGTTGTTTGCTGAAGATTATAGGTTACATACAAAACAAGATGAGGATGATAAGAATTTGG
TTTCTAAGTTTGATGTTGTTAAAGGTGTTCTTCTTCAACAAGCTGTTCAAGCTGTGGTTG
CAACCCTTTTGTTTGCAGTGACAGGAAGTGATAGCCAAAGTAGTACCAATGAGAATACTT
CTCTCCTTGTTTTAGCAAGACAATTTATTACTGCAATGTTGGTAATGGACACATGGCAAT
ACTTTATGCACAGATACATGCATCAGAACAAGTTCCTATACAAACACATTCACTCTCTAC
ATCACAGACTCATTGTACCCTATTCGTTTGGAGCTCTATACAATCATCCCATTGAGGGGC
TTCTTCTCGACACAATCGGCGGAGCTTTATCTTTCCTCCTATCTGGTATGAGTCCTCGAG
CATCCATTTTTTTCTTCTCCTTTGCCACCATTAAAACTGTGGATGACCACTGTGGGTTAT
GGCTTCCTGGGAATCTATTCCATATGTTTTTCAATAACAATTCTGCTTACCACGACGTAC
ACCATCAACTGTACGGAAACAAGTACAACTTCTCGCAACCGTTCTTTGTTATGTGGGACA
AAATCTTGGGTACCCACATGCCATACTCGTTAGAGAAGAGAGCTAGTGGTGGTTTTGAAT
CTAGACCTTGTAAAGCTTACAAGGATGAATGAGTAATTAATATGAGTAATTAATCTTTTT
GCTTGATGAGTATTTTTAATGTGTACCAGTATTGTTTTTTTTTTCTTCCCACGTTATGAT
GACGAGCACCGAGAGTGATCATGCCTGTATATACATTACATATGATGTGTCCTATTCTAT
TGAAGTGTTCGGAACCACGTCGAAACCACTCTCCGGCATGGAAGCTAGGACTGTTAGCTA
TTATATGGCTGTGCGTTTGATGTATCTCGCCCGTGGTAACAAAGATACACAATATTTTTC
TTTCTCTTATGTTCATATTAGATAGTTTTAATAAAGAATATTGAGGAGAAACCTATGCAA
TCTTTGATACTATCATAGTCCTTTATTTGTTTTGCAGACTTTGTATTGCATCTCTCATTC
TGTTTTCTAGAAAGATCAATTTATGTCCAAAGATTTATTGTTGAATTTGATTATTGTAAT
GGTAAATTGATAGCTGGTTCTAGTTAAAAAAAAAAAAAAAAAAAAAAA
|
| EST members of Unigene |
BT053067 EV259786 EV256431 CB892114 CB891987 BQ148726 BQ141379 BI269007 CX534718 CB892901 EY477505 EY477354 EY477316 EY477584 GE348361
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Lipid Metabolism > ko00100 Biosynthesis of steroids > K07750 methylsterol monooxygenase |
| EC |
1.14.13.72 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.36866.1.S1_at, Mtr.38384.1.S1_at
|
| Corresponding NCBI Gene |
843300
|
| Trichome-related Gene from Literature |
N/A
|