| Acc. |
TCMT43815 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
ATP-dependent DNA helicase 2 subunit KU80 OS=Arabidopsis thaliana E-value=0; ATP-dependent DNA helicase 2 subunit KU80 OS=Oryza sativa subsp. japonica E-value=0; X-ray repair cross-complementing protein 5 OS=Dictyostelium discoideum E-value=3e-76; X-ray repair cross-complementing protein 5 OS=Mus musculus E-value=5e-51; X-ray repair cross-complementing protein 5 OS=Homo sapiens E-value=5e-46; |
| Length |
2274 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MTUS_MIXTISSUE (3 ESTs); MT_SROOT_KV2 (2 ESTs); MtBA (2 ESTs); MT_ECELL (1 ESTs); MHRP-root (1 ESTs); MT_JAS_ROOR (1 ESTs); MT_KVKC (1 ESTs); MT_CDS (1 ESTs); |
| Sequence |
GGGAAGACGAATAAGCCAACCCATCATCTTCTTCCGCAAGCTTAACCTTCCACGCTCCCT
CTCTCCCTCTTCTTATTCCATCCATGGCTCGTAACAAGGAAGCTTTGCTTTTGCTGCTTG
ATGTGGGCCCATCCATGCATCCTGTTCTTCCTGAAGTTGAGAAAGTCTGTTCCATGCTTG
TTCAGAAAAAGTTGATTTATAACAAATATGATGAAGTGGGGATTGTATTATTTGGAACAG
AAGACACGGATAATGAATTAACTACAGAAGTTGGTGGATATCAGCATGTTGTGGTTTCGA
AAAATTCTAAAGTTGTGGATGGAGACATTGTTGAGGCTTTACAACAACTGCCTCGAGGAA
CTACTGATGGTGATTTTCTTGATGCTGTCATTGTTGCCATGGATATGTTAATAAAAAAGT
TTGGAGACACTAACAAAGGAAAGAAACGTCTTTGCCTTATTACAAATGCACAGTGTCCAA
TAAAAGATCCTTATGAAGGATCAAAAGAAGAGCAAGTTACCACGATTGCTAAACAAATGA
CAGCTCATGGTATGAAAATGGAAAGTATAATTGTACGAGGAAAACTTAGTCAAGATGCAA
ACAAGGAGATAATGGATGAGAATGATCGTCTTTTAAATATTTTTTCCAAGGAAACACAGA
CAAGATTGTTGTATGTTGAGGATCCAATTTCTTTGTTTGGTGCTCTTAAAACTCGAAATA
TAACTCCAGTGACAGTTTTCAGAGGGGATCTTGAATTGAGCCCAAAACTGAGGATTAAGG
TAATGGTGTACAAGAAAACACAAGAAGAGAAATTTCCAACTCTGAAGAAATTCTCTGATA
AGGCTCCTCAAACTGATAAATTCGCAACACATGAAGTCAAAGTAGATTATGAGTACAAGA
GTTCCGCAGATCCGGATATAGTTGTCCCTCCAGATCAAAGAATTAAAGGTTATCGATATG
GGCCTCAAATAATTCCTATTTCCTCTGCTGAATGGGATGCTGTAAAGTTCAAACCGGAAA
AGGGTGTGAAGCTTTTGGGATTTACTGATTCTTCTAATATATTGAGACACCAATACATGA
AAGATGTCTATGTGTTCATAGCTGAACCGGGGAATACAAAGGCTGTACTGGCAGTTTCTG
CACTATCAAGGGCTATGAAGGAAATGAATAAGGTTGCAATTTTACGGTGCGTCTGGAGAC
AGGGACAAGCGAATGTTGTTATTGGGGTCTTGACACCCAATGTATCTGATAGAGAAAATC
TTCCTGATTCATTTTACTTCAATATTCTTCCTTTTGCCGAGGATGTGCGTGAGTTTCAGT
TTCCTTCTTTCAGTAGTTTCCCAGCATCGTGCCAGCCAAATGAACAACAACTAGAATCAG
CAGCTAACTTCATAAAAATGCTGAATCTTGCACCAGATGGGAAACAGGAAGTTTTGCTCC
CTGACTTTACCCCAAATCCAGTACTGGCGCGCTTTTATCATTATCTTGATCTGAAATCAA
AGCATCCAGATGCTTCAGTGCCACCTCTCGATTATACACTCAGGAAAATTACAGAACCTG
AGACTGACTTGGTTTTGCAGAACCAATCTGTCATTGACTCATATCGTAGATCTTTTGAGA
TGCAGGGAAATCCCTTGAAAAAGCCAAGGCGTTTTTTGCGAGGAAAGACAAGTGATGAAG
AGGGTAAAGAAAACATCACAGCCCCGCCTGCCAATCTCATCGAATATACGTCTATTAAAG
TTGAGAAAATCGGGGATCTGACTCCTGTCCAAGATTTTGAAGCCATGATTTCACGCCGAG
ACAGTCCAGATTGGGTTGTAAAAGCAATCAAGGATATGAAAGATAAAATATTTGATATGG
TGGAGGACTCCCATGAAGGTGATAACTATCCCAAAGCACTGGACTGTTTAGTTGCGCTTC
GCAAAGGTTGCATACTTGAGCAGGAACCAAAACAATTCAACGATTTCCTTAAACATCTTT
GCAATTTCTGCCAAGAGAAAAACCTTCAAAGTTTCTGCGAACATCTTGCTGCTAAGGGAC
TCACATTGATCCCCAAAACAGAAGCTATAGACAGTGATGTCAGTGATGAAGAAGCCAGAA
GTTTCTTGGTAAAGTCTGAATCCAAATGTGATTAATTCATATATTTGTGCTGAAGCATCC
AAAGGCTTCAATTTTATACTTTTGGCAGAATACATGAATATACTGTAACTATTATTCGAA
ATACCTTAGATTCGGATATTTGATTATTAAAAATTTAAAAAAAAAAAAAAAAAA
|
| EST members of Unigene |
AF293343 CA922922 CA923218 CA922938 BG447880 BG588519 AI737612 AI737611 CX533058 BQ255163 AL367493 AL367492
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Replication and Repair > ko03450 Non-homologous end-joining > K10885 ATP-dependent DNA helicase 2 subunit 2 |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.1233.1.S1_at, Mtr.1234.1.S1_at
|
| Corresponding NCBI Gene |
841223
|
| Trichome-related Gene from Literature |
N/A
|