| Acc. |
TCMT46661 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase RNF13 OS=Bos taurus E-value=6e-25; E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus E-value=8e-25; E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii E-value=2e-24; E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens E-value=2e-24; E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus E-value=1e-23; |
| Length |
2134 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_FLOSEED_MTY (5 ESTs); MT_LEAF_PHOMA (2 ESTs); MT_GPOD (2 ESTs); MT_PhoLEAF (2 ESTs); MT_HOGA (2 ESTs); MT_Drought (2 ESTs); MT_DSTEM2 (2 ESTs); MT_SIRRA (1 ESTs); MtBC_GLOMUS (1 ESTs); MT_NOD_ROOT (1 ESTs); MHRP-root (1 ESTs); MT_DFLOWER (1 ESTs); |
| Sequence |
GAACCTTTATAAGATATGACATATTGATTATTTTTCTCATTATTGTAACAATATTAAATT
TCCCATTTTGCTGTCACAATATTATTTGCAATCAATTCGAAGAAAACAGAGAGCATCAAA
GGAATAGAACAAAGGAACATTCATTTTTGATATGGAAGCTGATGTTTCTCTTTTTTTTGC
AGTGTTTGCGAAACCCTAATTTTCAAAATTCCCAATTTCTGTTTGGATGATTTTCAACCC
AAAATCTAATCTTTCGTGCTTTTTTATTCAATTGCTTTGATGGGTTCCTCGAATCTTTGC
TTCTTTTTCTTCTCTTTGGTGAGTTTGTTTGCTATGGCGGCTGCTAAGGTTGTGTTGATT
GGGAACAACATCACTCTCTCGTTTGATGATATTGAAGCTAATTTCGCTCCATCGGTCAAA
GGTTCTGGAGAATATGGAGCCTTATTCTTGGCAGAGCCGCTTGATGCATGTACAGAACTT
ACGAATAAAGCTAGAACTCTTTCAAATGCTAGTTCACCTTTTGTTTTGATGGTTAGAGGG
GGGTGTAGCTTTGAGGACAAGGTTAGGATTGCACAAAGTGCTGGCTACAAAGCTGCAATT
GTCTACGACAGTGAAGATGGTGGCATCCTGGTTGCAATGGCAGGAAATTCTGCTGGTGTA
AGTATACATGCGGTATTTGTTTCAAAAGCTTCGGGTGAAATACTAAAGAAATACACTGGT
TTAATTAATGTGGAAACATGGCTCATTCCAACTTTTGAAAACTCAGCATGGTCTATCATG
GCAATTTCGTTCATTTCCCTGCTAGCTATGTCTGCAGTGCTGGCCACTTGTTTCTTCGTC
CGCAGGCATCGTATACGAAGAGAAAGGCCTCGAACTTCTTCTCATGTTCGTGAATTTCAT
GGCATGAGTAGTCGCTTAGTGAAAGCAATGCCAAGTTTGATTTTTACTTCTGCTTTGGAA
GATAACTGTACATCAAGAACATGTGCCATCTGCCTTGAAGATTATTGCGCTGGAGAGAAA
CTCAGGATTCTGCCCTGCTGTCACAAGTTTCATGCTGCCTGTGTGGATTCTTGGCTTACT
TCGTGGAGAACCTTTTGCCCAGTTTGCAAGCGTGATGCAAGAACGGGTCTGGCTGATCCA
CCACCTTCAGAATCGACACCTCTGCTGTCATCAACCCCGTCATCTGCAGCATCCTCTTTC
GTGTCTTCTATGAGGTCATCATTTGCTTCATCTTCAGCAATACAAATTGGTTCACCGTCG
CAATCTGTTTCTCGTAACCACTCTTTAGTAAGTACCCCTTACAATCAGCCATCTCTAAGG
TCCTACCGTCAATCCCCCTCCCTAAGCTTCAGCCGTAGCTCCGTGGATCTTAGAAACGCA
TCTCAAAGATCTCTAGCTTCACACATGAATTCACCGCGTTCCATCGGTTATCCATCTTTA
TCATCTCTTAACTCAAGGTACTTGCCTTCACACATTCCAAGTCCAAGCAATGCTTCAGTA
AGTTTCCTCGGTTCATCCAGTCATCAGCAGCATCCACTTCGATATAGTGAGTCAGCCTCA
AGCTTCTCACCATTTGCGTCTGCCAACTCCCTTCCGGAATGTTGAATTGTTCAATTGGAT
TTAATCATATGATTGAGATGTCTGTGCGGTTGAACCCGTGATTGCTGAGTCATCGAACCA
ATGAGTGGCCAAATGATGACGGTCAGTCTATGTCCATATAGACCCATCGACATTCCCTCC
TTCCATTTTGTGTCTCCTCTGGCAAATGACTTCCTTGTTGGCATCTGGTGTACATTGTAA
CATCTTGTGATGTTAGTTTTCTTTACATGTGATGATTATTATGGTTCTTACATTTTTCAG
GTTGGTGAGTTTGAGTACAGTAGTCACCACCAGTGTGTTGTTTACGCTTTGATTATTGAT
GTTTTGTTATAGCCTTGATTTTCAAAGTATAGTTAACTTGCTGCTAACAAGAGAAATGTT
GGACTGTATAGACAGATTGAAGTCAGAAGAGCTGTTTGTATTTTGTCTAATATGTTTGTC
CAATTGAATGATGAGATTATGTGATACTCTTTGGAGTTATTACCTACACATACCTTATCA
TCTAACTGGGCACAGTGAGTGTCAATAATATATG
|
| EST members of Unigene |
AL387142 BE325520 AW694445 DW018448 DW018415 DW018244 DW017046 DW016517 AW684925 BG588714 BQ146837 BQ139307 BQ139287 CA918351 BI308413 BF638212 BF637412 BI269743 BG648979 BG648968 BG450724 BE247894
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.12554.1.S1_at
|
| Corresponding NCBI Gene |
843529
|
| Trichome-related Gene from Literature |
N/A
|