| Acc. |
TCMT46960 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Pectate lyase OS=Zinnia elegans E-value=0; Probable pectate lyase 22 OS=Arabidopsis thaliana E-value=0; Probable pectate lyase 5 OS=Arabidopsis thaliana E-value=0; Probable pectate lyase 18 OS=Arabidopsis thaliana E-value=0; Probable pectate lyase P18 OS=Solanum lycopersicum E-value=0; |
| Length |
1774 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_Drought (2 ESTs); MT_JCVI-MT2 (2 ESTs); MT_CDS (2 ESTs); MHRP-root (2 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_DFLOWER (1 ESTs); MT_SROOT_KV1 (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_JCVI-MT1 (1 ESTs); |
| Sequence |
GGACCACAAACTATCTTTCTAAGTCTCATACCCTTCAATTACTCTTCCAAAAAAATATGA
CTTTTCTTTCATACTTTCTCATTCTTTTTGCTCTTTTAATCCCAAATTTTGTTTCATCCT
CTTCAGTTCAAGACCCTGAACTTGTTGTACAAGATGTACAAAGGAGCATCAATGTCTCTA
GGTCTAGGAGAAACTTGGGCTATTTATCATGTGGAACTGGCAACCCAATTGATGATTGTT
GGAGATGTGACCCAAATTGGGAGAACAACCGACAAAGACTAGCTGATTGTGCAATTGGAT
TTGGAAAAGATGCAATTGGTGGTAAAAATGGTAAAATCTACATTGTAACTGATTCAGGTG
ATGATGATGCAGTAAACCCTAAACCAGGAACCCTAAGGTATGGTGCAATTCAAGATGAAC
CATTATGGATCATATTCAAAAGAGATATGGTAATTCAGTTAAAACAAGAGCTTTTGGTAA
ATTCATACAAGACAATTGATGGAAGAGGTGCTAGTGTTCACATTGCAAATGGTGGATGTA
TTACAATACATTATGTTAATAATGTTATAATACATGGTATTCATGTTCATGATTGTGTTC
CAACAGGGAATACAAATATAAGGGATTCACCAGAACATAGTGGTTTTTGGACCGTTTCTG
ATGGTGATGGAATTTCAGTGTTTAATTCACAACATATTTGGATTGATCATTGTTCTTTGT
CTAATTGTCGTGATGGTCTTATTGATGTTATACATGGATCTAATGCTATTACTATTTCAA
ATAACTATATGACTCATCATGACAAAGTTATGCTTTTGGGACATAGTGATTCTTATACAC
AAGACAAGGACATGCAAGTTACTATTGCTTTTAATCATTTTGGTGAAGGGCTTGTCCAAA
GAATGCCAAGATGTAGACATGGCTATTTTCATGTGGTGAACAATGATTACACACATTGGG
AAATGTATGCAATTGGAGGGAGTGCTAACCCTACAATCAATAGCCAAGGGAACAGATTTC
TTGCACCAGATAATAGATTTAGCAAGGAAGTAACAAAGCATGAAGATGCATCAGAAAGTG
AATATAATAGTTGGAATTGGAGATCAGAGGGTGATTTGTTCTTGAATGGAGCATTCTTTA
GACAAACTGGTGCTGAATCTTCTTCAATCTATGCTAGGGCTTCAAGTCTTAGTGCAAGAC
CAGCCTCTCTTGTTGGTTCCATCACTACTACTTCTGGTGTGCTCACTTGCAAGAAGGGAA
ACCGTTGCTAATTCGCTACTAAAAAAAGTTGAAATGATGAGGGACAAAAAATATGAAGTT
TATCTCCGATTAAAATTGGAGATCAGTTTCATTTTTTCAGTCTCTAATTCTCGTCAATAA
TTTAACTTTTTTAATAGTGGTTAATGATTACTTTTACTTTATTAGCTAAGTAATTCAAAT
ACATTCGAAGGGAAACAAAAATTGATTAAGTAATTAAGAATGAGACTTCGTGCTTATGCT
TAATTTATTGATTCTCATCGGTTGCCCTTTTACAGCTGGTTTTACAAAATATTTAACTTT
GTTTCTTGAGGTTACAATGTCAAACTCTTATACCGAGTTGACACCTCCAATATCATATTT
ATATATAGCTTGCAACTACAAGTTGGGTATGGTTATTAAATTATTACATTTGGGTTTAAT
TACAACCTATGCCTTTTTCTTTTCATATATTGTAATCATATTGGCCATGTTGCTTGTACA
ATGGAAAGGAAATGAATGCAGTTAGTGTTGGTCG
|
| EST members of Unigene |
BT051056 BT053667 CA922515 EV260242 BG588411 BE239312 AW774411 BI273096 BF003634 BF634296 BF633007 GE349306 GE344200
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.12822.1.S1_at, Mtr.33908.1.S1_at
|
| Corresponding NCBI Gene |
836439
|
| Trichome-related Gene from Literature |
N/A
|