| Acc. |
TCMT49686 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana E-value=0; Probable ATP-dependent RNA helicase DDX47 OS=Mus musculus E-value=2e-97; Probable ATP-dependent RNA helicase DDX47 OS=Bos taurus E-value=5e-97; DEAD-box ATP-dependent RNA helicase 10 OS=Oryza sativa subsp. japonica E-value=3e-96; Probable ATP-dependent RNA helicase DDX47 OS=Homo sapiens E-value=9e-96; |
| Length |
1747 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DSTEM2 (3 ESTs); MT_Shoots (2 ESTs); MT_JCVI-MT1 (2 ESTs); MT_JAS_ROOR (2 ESTs); MT_MGHG (2 ESTs); MtBB_NOD (2 ESTs); MTAMP (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_DSIL (1 ESTs); MT_CDS (1 ESTs); MT_GSEED (1 ESTs); |
| Sequence |
CCAAAACACGACTTAGGCTGCGATAGGGATACACAATAGAAGATTGAGTCTCGCTCGCTC
GCCCAGAAAACGCAGCAGCAATTGTTTGTCGCCCGCCATAAACTTGTTCGGATTTTCCTT
CTCCAGTTTTCAATAATCATGTCAGAAGAAATGAAATCATTTACGGATTTGGGCTTATCT
GTTCAATTGGTGGAAGCTTGTGAAAAAATGCGTTGGTATAGTCCACTTAAGATTCAGACA
GAAGTGATTCCCCTTGCTCTACAAGGAAAAGATGATGTGATCGGAATTTCACCACCGCGT
TCTGGTAAGGCCGGGGCTTTTGTTCTTCCTATATTGCAGGCCCTCTTAGAAGCCGGACCC
AACCTAAACACGTCCTTTGCTTGTGTACTGTCTCCCTCAAGGGACCTTGTTTTTCGTATT
GCTGAGTATTTTCAAGTTCTAGGTTCTCAATTTGGTGTCAAGTGTGCTACCCTTGTTGAA
GCGAACGACATCATAGATCAAACCAACCAGATTTTACAGCAACCTCATCTTATTGTTGGA
ACCCTTCGACAAGTCTTTTATCACTTAAGACTAACCCAAGGATTTTCTCTTGCTAGATTA
AAATACCTGGTCATACATGAGGCAGATCTGCTGTTGAATGACCAGTTCGAGGAACAACAA
CTAAATGATATTTTATCAATAATTCCTAGTGAGCGGAGAACTTTTCTTTTTTCATCTACA
ATGACAGAGAAGGTCCATATGATCCAAAGATTGTCTTTAAGGAACCCTCTAAAGATTGAT
GTATCTTCCAAATATTCTACTGTGGTCACACAGCTGCAGCAGAGTTGCTTTATGCCAGCA
ATGCTTAAGGATTGCTACCTTGTATACATTCTCACTGAAATGACTGGAAGAAAATCAACG
GTATTCACTCAGACTTGTGGTTCAGCGTTTCTTCTGGCTTTAATTCTTAAGAATCTTGAT
TTCAGAGCCATCCCAATTATTAGTTATATGAGCCAGGCAAAGAAACTAGGAGCCCTGAAT
GCGTTCAAGTCTGGAAAGTTCAATATTCTCCTTTGTAGTGAAGCAGCTAGGAGGGGACTA
GATATTCCAGCGGTAGATATGGTGATTAACTACAACATACCTAGAGATCCCAATGATTAT
ATGCATCGTGTGGGATGGACTGGTCATGTTAATGCTGCCATTTCTTTTGTGAAACCCATA
TGAAGCGGGACAAACTTGAAAATGATAGAGAGACATACAGGCAAGAAGCTACCGGTGTAT
CCGGCACCATGTGAGAATGTTTTGCTTTGGAGAGGGACTGTTAGGGAGGCCGAAAGATTA
GCACGAAAGGAAATCAAAGAATCTGGTTGGAAGAGTGGAGGATATTTAGGAGACGAGGAG
GTCAAAAAGATCTCAAGTCTGCGTTGAAGGAATCATGTGAAGGTACAACCGTGATATTAA
CAAATAATATATTCGATCCAGGTTCAATATATTGCACATTATCTTAATGTGGAAGGAACT
TTCATTAGTAGTTGGTCATTACGAAGTTACATAAATATGCTCCTCAGCTCAAACTTGTTT
TTCTAATTGTCAATCATTTCCTTTGAAATGAATTGGGCTTTCTAGTTGTAAAGTTGTCTC
TTTGAGGATGGTTTATAACCATCTACAACCTTACTCCTACAACTTTGTTTCTCTGTGATG
CGGTGTAGCATTTCGTTTTACATCACGTAGCATCTTGATCTCAATGTTAATGTAGATTGT
CTTATTT
|
| EST members of Unigene |
BT052691 AL377216 AL377215 CX538907 CX528140 CX527480 BE325948 AW694201 AW690408 EV262721 EV257881 AJ502655 BQ138096 BF521540 CX535387 CX531355 BE941903 BE940903
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
3.6.1.- |
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.1 ATP-binding-cassette superfamily ABC ABC-type importers (all from Bacteria and Archaea) |
| Probeset |
Mtr.29601.1.S1_s_at, Mtr.4.1.S1_s_at, Mtr.43380.1.S1_s_at, Mtr.5560.1.S1_s_at
|
| Corresponding NCBI Gene |
836220
|
| Trichome-related Gene from Literature |
N/A
|