| Acc. |
TCMT53286 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana E-value=0; DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana E-value=0; DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica E-value=0; DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica E-value=0; Spliceosome RNA helicase DDX39B OS=Pongo abelii E-value=0; |
| Length |
1884 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT2 (2 ESTs); MT_GSEED (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_DSTEM2 (1 ESTs); MTAMP (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_DFLOWER (1 ESTs); MT_PhoLEAF (1 ESTs); MT_INSECT (1 ESTs); MT_JCVI-MT3 (1 ESTs); |
| Sequence |
GGGACTTTCATTTTCCCCCAAATTTTGATTTTTCTTTGCAGAATCTCTTCGGAAACCCTA
ACCCTGACAATCCTTCACTTCTCAAGCTTTCTCCAATTCCTTCTTCTCGCAGATAATGGG
TGAAACAAAGGAAGAAACATACCGAGGAAGAGCTTCTTGATTACGAAGAGGAGGATGAGA
AAGCACCTGATTCAGTCGGAGCTAAAGTTAACGGTGAATCTGGGAAGAAGGGCTATGTTG
GGATCCACAGTTCAGGATTCAGAGACTTTCTTCTAAAGCCAGAGCTTCTTCGTGCTATTG
TGGACTCGGGATTTGAGCATCCTTCTGAAGTGCAACATGAGTGCATACCACAAGCAATCC
TTGGAATGGATGTATTATGCCAGGCAAAATCGGGAATGGGAAAAACTGCTGTTTTTGTTC
TATCAACTTTGCAGCAGATTGATCCTGTTCCAGGCCAAGTTTCTGCTCTTATTCTGTGTC
ATACAAGGGAATTAGCATACCAGATATGCCATGAGTTTGAAAGGTTCAGCACCTACTTGG
CTGATCTCAAGGTTGCTGTCTTTTATGGTGGTGTCAACATTAAAGTTCACAAGGATCTGT
TGAAAAATGAATGCCCTCATATTGTCGTTGGTACACCTGGAAGAATACTAGCATTGGCCA
GGGATAAGGACCTTTCATTAAAGAATGTTAGGCATTTCATTCTGGATGAATGTGATAAGA
TGCTGGAATCACTGGACATGAGGAAAGATGTGCAAGATATTTTCAAGATGACACCCCATG
ATAAGCAAGTTATGATGTTTTCTGCAACACTCAGCAAGGAAATTCGCCCAGTCTGCAAAA
AATTTATGCAAGATCCAATGGAAAATTATGTTGACGATGAAGCGAAATTGACCCTTCATG
GTCTCGTTCAGCACTACATCAAATTGAAGGAGGAGGAGAAGAACCGAAAGTTGAACGATC
TTCTTGATGCACTGGACTTCAACCAAGTTGTGATCTTTGTGAAAAGTGTCAGCAGAGTCA
GCTGAGCTGGACAAGTTGCTTTGTGGAATGCAACTTTCCATCCATATGCATTCATTCTGG
AATGTCCCACGAAAGAAAGGTTGAAGCGGTATAAAGGTTTTAAGGAGGGGCATACAAGGA
TTCTTGTAGCAACAGATTTAGTTGGCAGGGGAATTGACATTGAACGTGTTAATATAGTGA
TAAACTATGACATGCCTGACTCTGCAGACACATACTTGCACAAGGTTGGCCGAGCTGGAA
GGTTTGGTACCAAGGGCCTTGCAATTACATTTGTTTCATGTTCAAGTGATGTTGATGTTC
TCAACAAATGTTCAGTCCCGGTTTGAGGTGGATATAAAACAGCTCCCTGAGCAGATTGAT
ACATCTACCTACATGCCATCATAATAACCTCTTGTGGTGTAATCCTTTGAATTAATTGGA
CTGTCTTTGATTATCTTACAATCCAGCTAAACAAAGCTCTTAGAACTGGGTGATTCACCT
TGTCATTGTCCAGTTCATGTACTTCTATTGACCCGTGAGACCGTTTTGTCGTTGGAGATA
AACTCGGTATTTGGATTTTGCAATATGACTGCTTCCAAATATGTGGATTAATTTACTGTA
TTCTAAATTATGTAGGTTTTTATTCCTAAAGGCTTATGTTTTTATGAATTTATCTTATGT
TCAATTAATTAGATTGGTTATTTAAAATCGAGGATGGAAATCCACCAGTTGCTTTGATTC
AACTTGTCTTGAATGCGTCAATGAATTTGACATTGGCCTCTGCTAATTATAAGATTATTC
TAGTAATGTTTTTTCTATTCATTTAAGTGCTATATCCACCATCCCAATTTTAATCTGAAT
TCGCTGAGGTTTATGAGCCTAAGA
|
| EST members of Unigene |
CX542046 AW559358 AW688109 AJ502983 BG646077 BQ147405 BE323933 BG449739 EY476189 GE349094 GE343963
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
3.6.1.- |
| Transcription Factor Family |
|
| Transporter Classification Family |
2.A.1 Major facilitator superfamily MFS; 2.A.16 Tellurite-resistance/dicarboxylate transporter TDT |
| Probeset |
Mtr.19302.1.S1_s_at, Mtr.23763.1.S1_s_at
|
| Corresponding NCBI Gene |
830986
|
| Trichome-related Gene from Literature |
N/A
|