| Acc. |
TCMT56418 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Uncharacterized PKHD-type hydroxylase At1g22950 OS=Arabidopsis thaliana E-value=0; 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Xenopus tropicalis E-value=5e-39; 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Danio rerio E-value=8e-37; 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Homo sapiens E-value=2e-36; 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 OS=Mus musculus E-value=5e-35; |
| Length |
1498 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MTUS_MIXTISSUE (2 ESTs); MT_DSTEM2 (2 ESTs); MT_HOGA (1 ESTs); MT_Drought (1 ESTs); MT_TRI (1 ESTs); MT_CDS (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_DLEAF (1 ESTs); MT_GPOD (1 ESTs); |
| Sequence |
GNNTATTCTTTTATCTCANNAATCTTCCTCTTCCCCGTTCTTCATTATTCATCCATTTCA
GTGTGACATCAAAGCCATGAATTGAATGAGAGAGTAAACCCTACAACACAAATCATGTAT
CATCACCATAACCATAACCATAACCAGAATGGTTCGTTGGAGCGCAGAGCTCAAGCATCA
AACGGAGACATTGCTGCTGCTACCACCAACGGTAACGGTGTTGTTGGTGCTTCCAATTTG
AATCCAACAACAAGACTTCTCGGAAGCCCTAGAGGAGACCACATGCCTGACAACTATGAA
GATCTTCCTTTGGATTTCAACCCACTTGTCTTCACTTCACTTGAAAGACATCTTCCTTCT
CACATCCTTAACCTCTCCAGAGACCTTAAAGCTCACTACATGTCTAACATTCTTCTCCGT
TATTTGCCTCACTCAGAACGTGTTCGGATGCAAAAGCAGAAGGAATACAGGCAAAAGATC
ATATTAAACTATCCTCCGCTTCATAAGGAGATATATACTATGCATAGTGAACACTTTTTT
GCTCCCTCGTTTCTCAGAGCTATTAAGGAAAATACAGAAGCTAGTTTTAGAAGTATAATG
GCCGAACCCTCCAGAGGAGTATATACGTTTGAAATGCTTCAACCACAGTTTTGTGAAATG
TTGGTATCTGAGGTAGATCATTTTGAAAGATGGGTCCATGAGACCAAATTCAGAATCATG
CGACCTAATACAATGAATCAATATGGTGCTGTTCTCGATGATTTTGGCCTGGAAACCATG
CTTGATAAATTGATGAACGATTTCATACGTCCTATAGCTCGAGTGTTCTTTTCTGAAGTT
GGTGGATCCACACTGGACTCTCATCATGGTTTTGTTGTTGAATATGGAACCAATAGGGAT
GTGGAACTTGGGTTCCACGTGGATGACGCAGAAGTCACCTTAAATATTTGCTTGGGAACA
CAATTTTCAGGTGGAGAACTGTTCTTCCGAGGTGTTCGATGTGATGAACATGTGAATACA
GAGACCCAACCAGGGGAGATATTCGATTATTCCCATGTTCCAGGACATGCAGTCCTTCAT
TCTGGTCGCCACCGTCATGGCGCTAGACCGACAATATCTGGGAATCGAATCAATTTAATT
CTCTGGTGTAGAAGTTCGGCGTTTAGAGAGATCAAGAAATATCAGAGAGAATTTCCGAGC
TGGTGTGGAGAATGCAGACGCAAGAAGAAGGAGAGAGAGCGCGTATCAATTGCTGCCACC
AAAGAGGAATTATTGAAGAGGGAACTTAAATCAGCCTCATGAACTTGCACCAGCACATGC
AAATGGTACTTGGTTCTTTTTGTATAATTGACTTGATTTATGAGTGTCAACTTGGCATGT
TGAAACTTTTCTGGATTCAGTAGTATTCTTAGTGTAACAATATGTGATTTTAGTTAAAAG
TAATATAAGCATACATTTCATATTTTGATGAATAACCATAATTGTTCAATTGGAAGCT
|
| EST members of Unigene |
BT053584 CF068945 CA919495 AW695716 AW695334 EV256623 BG453724 BI307954 CB894483 BF632480 EX529050
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Amino Acid Metabolism > ko00310 Lysine degradation > K00473 procollagen-lysine,2-oxoglutarate 5-dioxygenase;
|
| EC |
1.14.11.- 1.14.11.4 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.38368.1.S1_at
|
| Corresponding NCBI Gene |
821348
|
| Trichome-related Gene from Literature |
N/A
|