| Acc. |
TCMT43506 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster E-value=6e-27; Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus E-value=2e-25; Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus E-value=3e-25; E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens E-value=9e-25; E3 ubiquitin-protein ligase HERC2 OS=Mus musculus E-value=1e-24; |
| Length |
2157 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DLEAF (4 ESTs); MT_Shoots (2 ESTs); MT_DSTEM2 (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_DSIL (1 ESTs); MT_SIRRA (1 ESTs); MT_JAS_ROOR (1 ESTs); MT_Drought (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_TRI (1 ESTs); MT_GSEED (1 ESTs); |
| Sequence |
CACACACACTCCAACGTTAATCCATCAAAAACCCATTTCAATCTTTGTTTCATTCATCCA
AAGTTCTCGACTTTTTCACAAAAACATCATCAGATTCTCTTCAACCGATGCAAACACTGT
TTCAGAATTCATTCATGTTTGTTTTATGTTTGAGACCTGAGATTTGCTAGTGAATTATAT
TTTTGAGATATTTTCTTCTGCAAAGTTTGAGGGCACTGCTTAGAGTTTTTGCAGTGCCCA
TGGATGCCACAACCAGCGGAACCCCAACTATCCAATACCATAACATCACTGACCAGACAA
TTACTGCCATTGTTGTTGCCACACCACTTCCGACATTTCAACGGCAACAACGCCAATGCT
TAGGAAACTCTACTCCTGGAGAGTTTCCTTTGTCTGCTAGTCCCTCTATTGTCCTCCATG
TCCTTACATCATGTAATTTGGATCCTCAAGACCTCGCTAAACTAGAGGCAACATGCTCCT
TCTTCAGGCAGCCAGCAAACTTTGCTCCGGACTTTGCGCTGTCGTTAGCCGAACTTGCTG
CATTTGACATGTGCATGAAGAGAGCCATCTTTAAGCCAATGACAACAGAAGAAAGGCAAG
ATTTGAAGCAAAGGTGTGGAGGTTCTTGGAAGTTGGTTCTGAGGTATTTGTTGGCCGGAG
AAGCATGTTGTAGGAGGGAGAAATCACAGGCAATCGCAGGTCCTGGTCACAGCATTGCTG
TGACATCTAAAGGGGGATGTTTATTCATTTGGATCTAACAGTTCAGGACAACTCGGTCAT
GGCACCACCGAAGAAGAATGGCGACCAAAGCCAATAAGAACTTTGCAAGGCATTCGAATT
ATACAAGCTGCTGCTGGTGCTGGGAGGACAATGTTGATCACTGATTCTGGACAGGTCTAT
GCATTTGGGAAAGATTCTTTTGGGGAAGCTGAATATGGAGGTCAAGGATCTAAAACTGTC
ATAGCTCCACGGTTGGTGGAGTCTTTGAAAAACATATTTGTTGTCCAAGCTGCAATTGGT
AACTTTTTCACAGCTGTATTGTCAAGAGAGGGAAGGGTTTATACATTTTCTTGGGGTAGT
GATGGCAAACTTGGCCATCACACCGATTCAAATGATATGGAACCTCATCCTTTATTAGGA
GCTTTAGAAGACATACCTGTAGTGCAAATTGCTGCCGGATATTGCTACCTTCTTTGCCTG
GCTTGTCAACCAAGTGGAATGTCAGTATATTCAGTTGGATGTGGCCTTGGGTGGCAAGTT
AGGACACGGAACAAGAACTGATGAGAAGTTCCCTCGTTTGATCGAACAGTTCCAGACGCT
AAACCTTCAACCCATGGTTATTTCAGCTGGTGCTTGGCACGCCGCTGTGGTAGGACGGGA
TGGCCGTGTTTGCACATGGGGATGGGGACGATACGGTTGTTTGGGACATGGGAATGAAGA
ATGTGAAGCAGCACCTAAGGTAGTAGATGCATTGACCAATGTCAAAGCTGTTCATGTTGC
AACAGGAGATTACACAACCTTCGTGGTTGCTGAAGATGGTGATGTTTATTCATTTGGTTG
TGGAGAATCTGCTAGTCTCGGACATAATGCAGTAATTGATGCAGAGGGCAACAGACATGC
AAATGTGCTAAATCCAGAGCTTGTGACATCACTGAAACAGATCAATGAAAGGGTAGTACA
GATTAGTCTAACCAATTCCATATACTGGAATGCTCATACCTTTGCTCTCACTGAATCAGG
GAAGCTTTATGCATTTGGTGCTGGAGACAAAGGACAGCTAGGAATCGAACTTGTTGCCAA
CCAGACCGAAAGGGTAAATCCAGAACAGGTCGACATTGATCTTGGTTAACTGTTTGTGCT
AATCACCAATTCTTTAAACGGTTTTTATCGTCTAATTTATGATCATCATGCATAGCATTT
AGTGTTTAAAAATTCCTTGTCTATTTTGTAAATATAATCAAAAGAATGCATCAGTATCAT
GAAGGTCTAAGGTAGGTAGAACAGCTAACAAGGGCCTCAGCTACTGTCTTTATGGTCTTT
CATATCGCTCTTAGGCTTCAACTGTTTGTTGATAGTTTTATTTATACATTGTTGAAGGTT
CATTTGTTTAAAGTTTATAACTCTCCTTAATTTGTTTTCATAGCATCATTTGGTCTA
|
| EST members of Unigene |
CA923179 CX539867 CX525408 CX524251 AW689077 AW736210 BQ140524 BG454831 BG454765 BG454736 BE319101 BF518856 BQ153502 CX531332 BG451185 EX526646
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10595 E3 ubiquitin-protein ligase HERC2 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.40453.1.S1_at, Mtr.40455.1.S1_s_at
|
| Corresponding NCBI Gene |
822208
|
| Trichome-related Gene from Literature |
N/A
|