Acc. |
TCMT46762 |
Internal Acc. |
|
Type |
TC/Unigene
|
Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase XBAT33 OS=Arabidopsis thaliana E-value=0; Probable E3 ubiquitin-protein ligase XBOS33 OS=Oryza sativa subsp. japonica E-value=0; Probable E3 ubiquitin-protein ligase XBOS32 OS=Oryza sativa subsp. japonica E-value=0; E3 ubiquitin-protein ligase XBAT32 OS=Arabidopsis thaliana E-value=0; Probable E3 ubiquitin-protein ligase XBOS35 OS=Oryza sativa subsp. japonica E-value=0; |
Length |
2236 nt |
Species |
Medicago truncatula |
Belonged EST Libraries |
MT_SEEDROOT_KV3 (3 ESTs); MT_Shoots (2 ESTs); MT_DSTEM2 (2 ESTs); MT_JAS_ROOR (1 ESTs); MT_SROOT_KV1 (1 ESTs); MT_MGHG (1 ESTs); MT_Drought (1 ESTs); MT_NOD_GVN (1 ESTs); MT_GESD (1 ESTs); MT_GPOD (1 ESTs); MT_DSIL (1 ESTs); MT_VILEAF (1 ESTs); |
Sequence |
CCTCGTGCCGATTCGGCACGAGGAAAGAAGGTAAAGTGAACCTTCATTCCCTTTTCCTCT
TTGTTTTTTTCCTTCACACAAAAAACACCATTAACAAACAATAACCAAACACATTCCAAT
TTCCAAGTTCCAACCTTTCAGTTTCACCTTCATTTTTTGTATCCATCAGAAAAAGACATA
ACTGTCTCTGTTTCTTTCTGTGTTGCCACATCACTCTCACACATCAAACTTTTCATTTTT
CATCAAATCAAAAACACCCCATTAATAAAGTTTTCATTTTTAGTCAAATCAAAAACACCC
CATTAATTTTTGTTTTTTTTGGTTATTTATTGACCCAATTGTTTTGCTTAGAAGATTTTT
TCATCAGAAAGATGGGAAATTCTTTTGGTTGTTCAGCTTCTGGTGAGAGGTTGGTATCTG
CAGCAAGAGATGGTGATTTGGTTGAAGCAAAGATGCTTTTGGAATTCAATCCTTGTCTTG
CAAAATACTCAACTTTTGGTGGTCTTAATTCACCTCTTCATTTTGCAGCTTCTAAGGGTC
ATAACGAGATTGTGGCATTGTTGCTTGAAAAAGGAGCTGATGTGAATTCAAGGAACTATT
GTGGGCAGACAGCTTTGATGCAAGCTTGTAGACATGGTTATTGGGAAGTTGTACAAACCC
TTATGCTGTACAGATGTAATGTTATGAAAGCAGATTATCTAAGTGGGAGGACAGCTCTTC
ACTTTGCAGCTGTCAGTGGGCATGTAAGATGCATTAGACTTGTGGTGGCTGACTTGGTCC
CAAGTGCTCCTTATGAAACTCTACATGCTCGTGTGGATGCTGATGTTGGTGATGGATCAA
ATACAAAAAGAAAAAACGAACAAAGTGAATTGTCCAAGTTTGTAAACAAGACAGCAGATG
CAGGTATTACTGCACTTCATATGGCTGCGTTGAACGGGTACTTCGATTGTGTACAACTGC
TACTTGATCTTAATGCAAATGCATCAGCTGCAACATATCATTATGGAACATCAATGGATT
TAATAGGGGCTGGAAGCACTCCATTGCATTATGCTGCGTGTGGCGGAAATTTAAAATGCT
GTCAGATCCTCCTTTCAAAAGGTGCAACTCGGATGGCTTTGAACTGCAATGGGTGGCTTC
CACTTGATGTGGCTAGGATGTGGGGGCGTCACTGGCTTGAACCATTGCTGGCACCGAGTT
CTGATACCATCGTATCATCATTCCCTACTTCAAATTATTTGTTGTTGCCCCTCATGAGTG
TGCTCAACATAGCCAGGGAATATGGATTGCATTCTCCTACGACCTCATCCAATGAGATCG
ACTTCTGTGCTGTCTGCCTGGAGAGGCCATGTACAGTGGCTGCAGAAGGATGCATGCATG
AGCTTTGTGTAAGATGTGCACTCTACCTTTGCTCTACAGCCAATGTTTCTTCTGAAATGC
ATGGCCCTCCTGGTTCTGTCCCTTGTCCCCTTTGTCGACATGGAATTATCTCTTTCGTCA
AGTTACCAAGTTTCCAACCAAAAGAAAATAAATTGCATGCGTCTCTCAGCATGTGTACAC
CATGCATACAACATCCACGTGACATAGATCAATCCTCTTTTTCTCATAATACATCGGAAA
TTCGAAAAAACCGGGTTGCTTCTGTTTCTTCCGAGATGCTTTGCCCTGTCACCTGTACAC
CATTTCCATCTGTAGCGATTCCTTTATGTACTTGCAATGATGGTCCTTGTCCGCCATTTG
AACCTGGTGAAGATGAAACACAAGATGAATCACCTCGTCACTCACAAGCTTCGACAACAG
ATCAAGATAAAATGGAAGGACCAAAACTGGTGAAAAAAACATGTTCAAATATGTTTTGGG
GTAGAAGAAGTTGCAGCAGGGAGAACCAATGTAATTCAGAAATAAATGCATGATTGATTC
AATAGGCAATTTACCGTCTTAGATCAACAATGTGAAGTCCACAGTTGTCTTATTATGCAA
CCTCAAATAGTGAAATCTAGTGGATGCATATAGCAAGAAGAAATCAAGCTTCTTTGCTTC
TGTTTTACTGCAAAGTCTGCATACTTGGTGAAAGATAATATTCTTGCGTTTCAGCATTCC
TCTTTTTTATTTATCAGTTATGATATTTAGAGAGGGTTTGTACAATTAGTCGTTATTGCA
ATTGGATTTTATTTTGCAATATAAAAGATAGTTTTTAGGTGGTGACTGGGTGAATGCAAA
AACTAAAGTACCTTTC
|
EST members of Unigene |
CX526864 CX525407 AW694930 AW694733 BE124454 BI310302 CB891620 AW774783 AW736312 BI308301 BF521175 CX521685 CX532397 BE203154 BE942784 BG450997
|
InterProScan Domain |
|
Gene Ontology |
|
KEGG Orthology |
|
EC |
|
Transcription Factor Family |
|
Transporter Classification Family |
1.A.1 Voltage-gated ion channel superfamily VIC |
Probeset |
Mtr.37541.1.S1_at
|
Corresponding NCBI Gene |
830618
|
Trichome-related Gene from Literature |
N/A
|