| Acc. |
TCMT52817 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
DEAD-box ATP-dependent RNA helicase 56 OS=Arabidopsis thaliana E-value=0; DEAD-box ATP-dependent RNA helicase 15 OS=Arabidopsis thaliana E-value=0; DEAD-box ATP-dependent RNA helicase 56 OS=Oryza sativa subsp. japonica E-value=0; DEAD-box ATP-dependent RNA helicase 15 OS=Oryza sativa subsp. japonica E-value=0; ATP-dependent RNA helicase DDX39A OS=Mus musculus E-value=0; |
| Length |
1774 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT1 (4 ESTs); MT_LEAF_PHOMA (3 ESTs); MT_CDS (3 ESTs); MtBB_NOD (2 ESTs); MT_JCVI-MT2 (2 ESTs); MT_DFLOWER (2 ESTs); MT_INSECT (1 ESTs); MT_GSEED (1 ESTs); MT_DSTEM2 (1 ESTs); MT_NOD_GVN (1 ESTs); MT_DLEAF (1 ESTs); MT_DSIL (1 ESTs); MT_JAS_ROOR (1 ESTs); MTUS_MIXTISSUE (1 ESTs); |
| Sequence |
GAATCGTTCCTAAAACCCAAAAATCAGATCTAGGGTTTTTCTTCCTCAAAGAACCAGAAG
CCGCAAATTCTTCACGTTTTCAAAGGGAAGAGAATATGGGTGAATTGAAAGATACTGAAG
TTTACGAGGAAGAGCTTATCGATTACGAAGAAGAAGATGAAAAAGCTCTTGATTCTACTA
AACCCACTACTGAATCCGTCAAAAAGGGCTACGTTGGGATCCATAGTTCGGGATTCCGAG
ACTTCCTGTTGAAACCAGAGCTTCTCCGAGCCATTGTAGATTCAGGGTTTGAGCATCCTT
CAGAAGTGCAACACGAATGCATCCCCCAGGCAATTTTAGGAATGGACGTCATTTGCCAAG
CAAAATCTGGGATGGGAAAGACTGCTGTTTTTGTTCTGTCAACACTTCAGCAAATTGATC
CTGTTCCTGGTCAGGTTGCAGCACTTGTTCTTTGCCACACGAGAGAACTGGCTTATCAGA
TTTGCCACGAAGTTGAGAGGTTCAGCACATATCTTCCAGATATAAAAGTTGCTGTTTTCT
ACGGTGGTGTCAACATCAAGGTTCACAAAGATTTGCTCAAGAATGAGTGCCCACACATTG
TTGTTGGAACACCTGGGAGGATTCTTGCCCTGACTAGAGATAAGGACCTTGGTTTGAAGA
ATGTGAGGCATTTTATACTTGATGAGTGTGACAAGATGCTGGAATCACTCGACATGAGAA
AAGATGTGCAAGAGATTTTCAAATTGACTCCCCATGATAAACAAGTGATGATGTTTTCGG
CTACACTCAGCAAGGAAATCCGACCTGTTTGCAAGAAATTCATGCAAGATCCCATGGAAA
TTTATGTTGATGATGAGGCCAAATTGACTCTTCATGGTCTTGTTCAGCACTACATTAAAT
TACAAGAGCCAGAGAAGAATCGTAAGCTGAATGATCTTCTTGATGCTCTTGACTTCAACC
AAGTTGTTATTTTTGTCAAAAGTGTTAGCAGAGCAGCAGAATTGAACAAGTTGCTTGTTG
AGTGTAACTTCCCATCAATATGCATACATTCTGGAATGTCACAGGAAGAAAGATTGAAGC
GATACAAGGGCTTCAAAGAGGGGAAGCAAAGAATTCTCGTGGCAACAGATTTAGTAGGGA
GGGGGATTGATATTGAGCGTGTTAATATAGTCATCAACTATGACATGCCTGATTCTGCTG
ATACCTATCTTCACAGGGTGGGTAGAGCTGGTAGATTTGGCACCAAGGGGCTTGCGATTA
CCTTTGTGTCTTCTGCTGGTGACTCTGAAGTTCTTAATCAGGTGCAATCTAGGTTTGAGG
TTGATATAAAGGAGCTTCCTGAACAAATTGACACCTCCACATACATGCCTAATTGATTAA
GTTTTGAGACGTGATTTGGAGCATAATGCAAATGATCTGTTGCTGTTGCCAACCGGGGAT
GGATTTGTTGGCGTCATAAATTTCAGTGTTTTGAAGAGAATATTTAACGAAAGATATTCT
TTAAACTGTAATGAAAAATAGGGAATTCGAATGGCTCCTGAGTTTTTGGGAGAAGACTAT
CAATTATTCCATGTTTTGTTTGCTCCTGCATCCGTTTTTTTTTATTCTGATAGACAAATA
CAATGTAGGATCTGTTTTAGAAGTTGCACACCGTTATCCACGCTGTTAATGTTTACATTA
AAATTACTTAAATCCCCCCTAAAGTATAGTACATTGTTCGTGATGGGATATTTTGTAGAT
GAATATATTATCACTGCTTGTTTAAGGTTCTAAA
|
| EST members of Unigene |
BT052532 BT052533 BT053663 CF069121 AL377938 AL377937 CX542474 AW691418 EV261229 EV260923 EV260723 EV256302 AW127250 BI272444 BI270309 BQ139738 BQ139590 BQ138802 BE318847 BF521019 CX529238 BI267491 GE350748 GE345847
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
3.6.1.- |
| Transcription Factor Family |
|
| Transporter Classification Family |
2.A.1 Major facilitator superfamily MFS; 2.A.16 Tellurite-resistance/dicarboxylate transporter TDT |
| Probeset |
Mtr.12539.1.S1_at, Mtr.35807.1.S1_at
|
| Corresponding NCBI Gene |
830986
|
| Trichome-related Gene from Literature |
N/A
|