| Acc. |
TCMT56078 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Splicing factor 3A subunit 3 OS=Mus musculus E-value=0; Splicing factor 3A subunit 3 OS=Homo sapiens E-value=0; Splicing factor 3A subunit 3 OS=Drosophila melanogaster E-value=0; Pre-mRNA-splicing factor sap61 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=6e-76; Pre-mRNA-splicing factor PRP9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=4e-30; |
| Length |
2132 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT1 (4 ESTs); MT_CDS (3 ESTs); MtBA (2 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_NOD_GVN (1 ESTs); MT_NOD_ROOT (1 ESTs); MT_SIRRA (1 ESTs); MTFLOW (1 ESTs); MT_INSECT (1 ESTs); |
| Sequence |
GGAGTAATTGAAATATGCACGATAATTTTAAGTCGACGACAGTGCAAGGTAACCTAATTC
CTTACAGCAGCACCGTGAACGAAACCCGCACCGTCTCTCTCAAAGTCTCCGATAAAGCAA
AATTCAACCTCCACTCTGATCGAGAATGTCTTCAACGTTGCTAGAAGCAACTCGAGCAGC
ACATGAGGAAGTGGAGCGATTGGAGAGGGTAATAGTGAAGGATCTCCAGAATGAACCAAC
TTCCAACAAGGACCGTTTGTATCAGAGTCACCGTGTTCGGAATATGATTGTTACTATCAC
TTCCACCACTGAACGACTTATTGATATATATGATGATAAAGATAATGCTAGGAAGGATGA
GATTGCTGCACTTGGTGGACAAACTGCTACTGGAATCAATCTTTTTAGTGCCTTTTATGA
TAGACTCAAAGAGATACGAGAGTATCATAGGAAGCACCCAGCTGCACGTGTTGTTGACGC
AAATGACGATTTTGAAGATCTTCTTAAAGAGGAACCTAAAATTGAGTTTAGCGGAGAGGA
AGCTTTTGGTCGATACTTAGACATTAATGAGTTATACCAGCAGTATGTCAATTCTAAGTT
TGGAGAGCCAATTGAATATTCTGCATACCTTGATATTTTTTCTGAGACAGATAAGATTCC
TCGCAAAATGAAAACAACCAGGCAGTACAGGGAGTACTTGAAGAATCTTTTGCAGTATCT
AACATCTTTTTTCCATCGGACAGAACCCCTGCAAGATCTTGATAGAATCTTTTCAAAGGT
AACAACTGAGTTCAATGAAAATTGGGCTACTGGAAGGGTATTGGGATGGGAGAATGTCAA
TCAGGAGAATGGACATGTACCTGCTCAGCACACTGCAATTGATCTTGATTATTACAGTAC
AGTTGAAGAGCTTATGGAAGTGGGTCCTGAAAGGTTAAAGGAGGCACTTGCTGCATTGGG
ACTTAAGACTGGTGGCACTATTCAGCAACGTGCAGAGAGACTCTTCCTCACAAAGCACAC
GCCTCTTGAAATGCTGGACAAGAAGCATTTTGCCAAGGGGGCGCGTGGTTCAGAAAAAAA
TGGGGTAGCTGCTGCTCCACAAGATGGAAATTTAAAAGAAATTGCATTAATGGAGGCCAA
AATGAATAAACTGTGTGATTTGTTAGATGAGACAATTACTCGAACAAAAGACAATATTGT
AAAGAAGCAAGCCCTAACATACGAGGAAATCGAAGCAGAACGTGAGGAGGAAGAGACTCA
AGAGGACTCTGAAAGCGAAGATGACGAGCAGCAGATTTATAATCCCTTAAAGTTACCAAT
GGGATGGGATGGGAAGCCTATACCTTACTGGCTGTATAAGCTACATGGTCTGGGTCAGGA
ATTTAAGTGCGAGATATGCGGGAACTACAGTTATTGGGGGCGTCGTGCTTTTGAACGACA
CTTTAAAGAATGGCGTCATCAACATGGGATGCGATGCCTTGGTATACCAAATACAAAGAA
CTTCAATGAAATTACGTCAATTGAGGAAGCAAAAGAGCTCTGGAAGAAGATACAGCAGAG
ACAAGGAGTGAACAAGTGGCGCCCAGATCTAGAGGAAGAGTATGAAGACAAAGAAGGCAA
CATCTATAATAAGAAGACATATACTGATTTACAACGCCAGGGGCTGATATGAAAAGAAAG
AATCTTCTTTCCAATTCTTCTTCTATTAGTAAAAGGAGGGGGAGGGGAATCCTTTTTGCA
TCACCTATGAAGAGGAAGCAATTTGTTTTCGGCAGGGTTTTTAGGGGAATGGTTGTATCT
TAGCAAAATATTCATCCCTACTGGGGAGAAGAATGGGAACAGACAAGGAGCCATATTTTG
TGAATTGCGGCGCACTTTCTTGAATAACTGTGAATTTGTGACTGATATCCTAACAAAACG
GGAGAAGAAACAACAATTCTTATCGCTGTTGCATTGTACCAATTATTATTGTTATAGGTT
TCTGAGTGATATTGGCCAACTAATGTCTTTCTTTAATGGTGTAGATTTAATGGGATATAC
TTTTCTATTTGCATGTCAAGTTAAGTTTGGAATATACTTTGCATGAACAATAAAAAGTAC
CTTAGTGGAAAGAAAAAAAAAAAAAAAAAAAA
|
| EST members of Unigene |
BT052891 BT052890 BT053001 CF068457 AW559748 EV259674 EV258647 EV255686 EV255287 AW777069 AW685806 BQ157265 AJ497370 AL367939 AL367938 BF641426
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.12902.1.S1_s_at, Mtr.42062.1.S1_at, Mtr.49079.1.S1_at
|
| Corresponding NCBI Gene |
830503
|
| Trichome-related Gene from Literature |
N/A
|