| Acc. |
TCMT56219 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Putative transcription elongation factor SPT5 homolog 1 OS=Arabidopsis thaliana E-value=0; Putative transcription elongation factor SPT5 homolog 2 OS=Arabidopsis thaliana E-value=0; Transcription elongation factor SPT5 OS=Gallus gallus E-value=6e-73; Transcription elongation factor SPT5 OS=Mus musculus E-value=2e-71; Transcription elongation factor SPT5 OS=Pongo abelii E-value=3e-70; |
| Length |
2345 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_HOGA (2 ESTs); MtBA (2 ESTs); MT_DSIL (2 ESTs); MT_PhoLEAF (2 ESTs); MT_KVKC (1 ESTs); MT_Drought (1 ESTs); MT_TRI (1 ESTs); MT_NOD_GVN (1 ESTs); MT_LEAF_PHOMA (1 ESTs); GLSD (1 ESTs); MT_JAS_ROOR (1 ESTs); |
| Sequence |
GAGGATAGATTTACAGGCTCTCGCAAACAAATTGGAAGGTAGAGAAGTTGTGAAAAAGAA
GGCATTTGTCCCCCCTCCTCGTTTTATGAATGTTGAAGAAGCTAGGGAACTGCATATCCG
TGTTGAGCATAGGCGTGATGCCACCGGCGGGGAACGGTTTGACACCATTGGAGGCATGAT
GTTTAAAGATGGGTTCTTATACAAATCTGTATCTATAAAATCCCTTTATTCCCAGAACAT
CAAACCTACGTTTGACGAGCTCGAAAAATTTCGTAAACCGGGTGAAACTGGAGATGTAGC
CAGTCTGTCAACTCTGTTTGCCAACAGAAAGAAAGGGCATTTCATGAAAGGTGATGCAGT
TATTGTCATCAAGGGCGATTTGAAGAATTTAAAGGGATGGGTGGAGAAAGTTGACGAGGA
TAATGTTTCATATTAGACCAGAAATGAAGGATTTACCTAAAACTCTTGCAGTAAATGAAA
AGGAACTTTGTAAATATTTTGAACCCGGAAACCATGTTAAAGTTGTTTCTTGGTGCTCAA
GAGGGTGCTACTGGCATGGTTGTGAAGGTGGAGCAGCATGTCCTGATCTTAATATCTGAT
ACCACAAAGGAGCATATCCGTGCGTTTGCAGATGATGTTGTAGAGAGTTCTGAAGTAACC
ACCGGTGTGACTAAAATTGGGGACTATGAACTTCGTGATCTTGTATTGCTAGACAATTCG
AGTTTTGGTGTCATAATCCGTGTAGAAAGTGAGGCATTTCAGGTTCTTAAGGGTGTTACC
TGACAGACCTGAAGTTGTGCTTGTTAAATTAAGAGAGATCAAGTGTAAGCTAGAGAAGAA
AATAAATGTGCAGGATAAGTTTAGGAATACAGTATCATCAAAAGATGTTGTGCGGATTCT
TGAAGGTCCCTGCAAAGGAAACCAAGGTTCTGTGGAGCACATATATAGAGGGGTCTTGTT
CGTCTTCGATCGCCATCATCTTGAACATGCAGGCTTTATGTGTGTTAAGGCCCAATCATG
TGTAGTTGTGGGAGGTTCACGCTCCAATAGTGACAGAAATGGTGATGTACACTCGAGATT
CCCCGGTCTTAGAACTCCACCTCGCATTCCACAGTCCCCACATAGGTTTTCTCGAGGAGG
GCCTCCATCTGCTGGAGGTAGACATAATAGGGGTGGAAGGGGGCATGATGGTTTGACGGG
TGCAACTGTTAAAGTACGACAGGGCTCCTATAAAGGTTATCGTGGACGTGTTATAGAAGT
TAAAGGATCATTCGTTCGGGTTGAATTGGAATCCCAAATGAAGGTTGTAACCGCTGACCG
CAATCATATATCTGACAATGTGGCCGTTACCCCACAACGTGAAACATCATCTCGATATGG
GATGGGAAGTGAAACCCCAATGCATCCATCTCGAACTCCTTTGCACCCATATATGACTCC
GATGAGAGATGCAGGAGCAACTCCAATTCATGATGGAATGAGGACACCTATGCGTGACCG
AGCTTGGAATCCTTATGCGCCAATGAGTCCTCCTAGGGATAACTGGGAAGATGGAAATCC
AGGCTCTTGGGGGGCCAGTCCACAGTATCAGCCAGGTAGCCCTCCTTCCCGGCCATATGA
AGCACCAACTCCTGGTGCTGGTTGGGCTAGTACTCCCGGTGGCAATTATAGTGAGGCCGG
AACGCCACGGGACAGTTCTGCCTACGCTAATGCTCCAAGCCCATATTTACCATCAACACC
AGGGCAGCCTATGACACCAAATTCTGCATCTTATCTTCCTGGCACCCCTGGAGGACAGCC
TATGACTCCAGGAACTGGTGGTCTGGACATCATGTCCCCAGTATTGGGTGGGGACAATGA
AGGGCCTTGGTTTATGCCAGACATATTGGTCAATGTACACAGGGCCGGAGAGGAGTCTGT
TGGAGTTATAAAAGAAGTTCTCCCGGATGGTTCTTATAGGGTAGCCCTTGGGTCTAACGG
AAATGGTGAAACAATATCGGCCCTTTCCAATGAAGTGGAGGCTGTAGTGCCAAGAAAATC
TGATAAAATAAAGATAATGGGAGGAGGGACTTTGCGAGGTTCCACTGGCAAGTTGATTGG
TGTGGATGGCACTGATGGCATAGTAAAAGTAGACGACACGTTGGATGTGAAGATTTTAGA
CTTGGTTATTCTGGCAAAATTAGCTCAACCATGAGACTTCTTGTAGAGCAATTGTTTAAC
AGGGACACTATTATCGTAGGAATGAGGATTTAACGAAACATACGAATGTGTGATTGCCTC
TTTTTCTCATGTATGGTTTTTTTTTGTTTTGTTTTCCAAATAAATATAATATAAAAATAT
ATAAT
|
| EST members of Unigene |
BE124702 BQ138215 BF519488 AW776762 CA858139 BG458214 BG457466 CX534770 BG648200 BG648121 BQ165717 AL367951 AL366675 BE247983 EX531100
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Transcription > ko03020 RNA polymerase > K03006 DNA-directed RNA polymerase II subunit A |
| EC |
2.7.7.6 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.12645.1.S1_at
|
| Corresponding NCBI Gene |
826391
|
| Trichome-related Gene from Literature |
N/A
|