| Acc. |
TCMT40969 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Signal recognition particle 54 kDa protein 2 OS=Solanum lycopersicum E-value=0; Signal recognition particle 54 kDa protein 3 OS=Arabidopsis thaliana E-value=0; Signal recognition particle 54 kDa protein 1 OS=Solanum lycopersicum E-value=0; Signal recognition particle 54 kDa protein 2 OS=Hordeum vulgare E-value=0; Signal recognition particle 54 kDa protein 1 OS=Hordeum vulgare E-value=0; |
| Length |
1943 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JAS_ROOR (3 ESTs); MTUS_MIXTISSUE (3 ESTs); MT_DLEAF (3 ESTs); MtBA (2 ESTs); MT_Drought (2 ESTs); MT_GESD (2 ESTs); MT_JCVI-MT2 (2 ESTs); MtSNF (1 ESTs); MT_SROOT_KV0 (1 ESTs); MT_VILEAF (1 ESTs); MT_ECELL (1 ESTs); MT_MGHG (1 ESTs); MT_NOD_GVN (1 ESTs); MT_INSECT (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_DFLOWER (1 ESTs); |
| Sequence |
CTTCAATTCGCGTGGAAGAAACTCTTTTTCCGATCTTCCTCAGAAAAACTTCCATCAAAC
CCTAAATCCCCAAATCCTTCATCTCAGAAATCTTGATCAAGATGGTGCTCGCAGATTTAG
GAGGGAGCATTACGCGTGCTCTAAAGCAGATGAGCAATGCAACAATCATTGATGAAAAAG
TTTTGAACGAATGTCTCAATGAAATCACTCGCGCTCTTCTTCAATCCGATGTTCAATTCA
AGCTTGTTAGGGATATGCAAACCAATATTAAGAAGATTGTTAATCTTGATGATCTTGCTG
CTGGTCATAATAAACGTAGAATCATCCAACAAGCTGTGTTCAATGAGCTCTGCAATATCT
TGGATCCTGGAAAGCCCGCTTTCACTCCCAAAAAAGGAAAAGCTAGTGTTGTCATGTTCG
TTGGTTTACAAGGATCTGGGAAAACCACTACTTGTACAAAATATGCATTTTATCATCAAA
AGAAAGGCTGGAAGCCAGCTCTAGTATGTGCAGATACATTCAGAGCTGGTGCGTTTGATC
AGTTGAAGCAAAATGCAACCAAAGCTAAGATCCCTTTCTATGGAAGCTATATGGAGTCAG
ATCCTGTGAAAATTGCTGTGGAAGGTGTGGAAAGATTCAAGAAAGAAAACTGTGATCTTA
TAATTGTTGATACTAGTGGGCGGCACAAACAAGAAGCTGCTCTTTTTGAAGAAATGCGTC
AAGTTTCAGAAGCAACGAAACCAGATCTTGTTATCTTTGTCATGGATAGCAGTATTGGTC
AGGCTGCTTTTGATCAGGCCCAAGCATTTAAACAGAGTGTTGCAGTTGGAGCTGTCATTA
TCACAAAAATGGATGGCCATGCAAAGGGTGATGGTGCACTTAGTGCTGTTGCGGCTACAA
AGAGTCCTGTCATATTCATTGGAACTGGAGAACACATGGATGAATTTGAAGTTTTTGATG
TTAAACCATTTGTCAGTCGTCTATTAGGCCAGGGAGACTTGTCTGGGTTCATGAACAAAA
TCCATGAAGTTGTTCCAATGGATCAACAGCCTGAACTGCTTAATAAGCTGCAAGAAGGAA
CCTTTACCTTGAGGATTATGTACGAGCAGTTTCAGAATATTCTTAAGATGGGTCCCATGA
GCGAGGTTTTTTCTATGCTACCAGGATTTAGCAATGAATTACTACCAAAAGGCAAGGATC
AGGACAGCCAGGCAAAAATTAAGCGTTACATGACAATGATGGACTCAATGACAAATGAAG
AGTTGGATAGTTCAAACCCAAAGCTCATGAATGAGTCACGGATGATGCGTATAGCTCGAG
GTTCTGGTCGGCAAGTTAGGGAAGTAATGGAGATGATGGAAGAGTACAAGCGTCTCGCAA
AGATATGGAGCAAAATGAAAGGACTTAAAATACCAAAGAAGGGAGACATGAATAGCATGA
CTCGAAATATGAATGCCACCCACATGAGCAAAATCCTCCCTCCACAGATGCTAAAGCAAA
TTGGAGGTATGGGTGGGTTACAAAGCTTGATGAAATCGATGGGATCTAACAAGGACATGA
TGGGAATGTTTGGTGGCGGTGGCGAGCAGTAGGTTCTTAATGGCTTATGCGCTGCCGAGG
TTTGTTTCTGATTACTTCCTCTTGTGCTTCATAAGAGTTCAAATCGTCATTGCGTAATCT
TGGCAGTTTGAATTGGATTCAGATGTGCTGTCAACTAATCTGCTGACTGCAGAAATCTCA
ATGGGCCATTAGTTAATTACCTTGACAGTTTTTCTTCTTCTTTTTACGTGTAAAACTATT
TTGTTTCCCTCAATTGCTGTATATTTACTAGTCTTCAGATAGCAGCCAAAGTATTTGTTG
TGAATCAGAAATTTTCTTGATCAGTGTAACATTAAAAATTAATTATAAACTGAACTTCTC
TCCATAGTAGGAGGTTCATACTC
|
| EST members of Unigene |
CF069817 CA920184 CA921424 BF645891 BG583726 CA918473 BI311899 AW773868 BI273186 BG453847 BG452536 BG452140 AJ845750 BE205534 CX521771 CX532433 CX529077 CX528752 AL370469 AL370468 BE942422 BF634942 BF632098 BF642111 GE350889 GE346004
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko03060 Protein export > K03106 signal recognition particle, subunit SRP54 |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.5 Type II (general) secretory pathway IISP |
| Probeset |
Mtr.24275.1.S1_s_at, Mtr.49272.1.S1_at
|
| Corresponding NCBI Gene |
841312
|
| Trichome-related Gene from Literature |
N/A
|