| Acc. |
TCMT46764 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas reinhardtii E-value=1e-77; Ribosome biogenesis protein wdr12 OS=Xenopus tropicalis E-value=2e-74; Ribosome biogenesis protein wdr12 OS=Danio rerio E-value=2e-74; Ribosome biogenesis protein WDR12 OS=Bos taurus E-value=1e-73; Ribosome biogenesis protein WDR12 OS=Homo sapiens E-value=6e-73; |
| Length |
1704 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MTGIM (2 ESTs); MT_JCVI-MT3 (2 ESTs); MT_JCVI-MT2 (2 ESTs); MtBB_NOD (2 ESTs); MT_NOD_ROOT (2 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_SROOT_KV0 (1 ESTs); MT_HOGA (1 ESTs); MT_CDS (1 ESTs); MT_ECELL (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_NOD_GVN (1 ESTs); |
| Sequence |
CCTTCCAGTGTTACACAGTCAGCCTCAGGTAACAAGTTCGATTTTTATTAGAATTTATAA
CGAAACGACGTCGTAATACCAGACCTAAATAACGAAGTCTAAAGCCCTAGTTAAAGTGTT
ACACAGTCAGCCTCAGAAGAAGACAATGATGAACGAAGAAGATAATGGCGAAAGTAGTAC
TCGAAGGATCCAAGTCCGTTTCGTAACAAGCTTACCCGAACCATTCAAAGTTCCAAGCTC
AGCCATAGCTATCCCTGTCGATCTCACCAGATTCGGCCTCTCCTCTCTCGTCAATGCGCT
TCTCCAATCCAAAGATGAGGATCATAAATCCGAACCGTTTGATTTTTTGATTGATGGCGA
GTTTGTTCGTATGTCTCTTGAGGATTTTCTCCTTGCTAAGGGAATCTCTGCGGAAAGGAT
ATTGGAAATTGAGTACATAAGGTCTGTAGCCCCACGAAAGGAAGAGGACCCTTCATTACA
TGATGACTGGGTCAGTGCTGTTGATGGTTCTTCTTCTCGGTTTATTTTGACAGGCTGTTA
TGATGGTTTTGGAAGGGTATGGGAAGGTGCTGGATTATGTACACATATATTGGAGGGACA
CAGCGACGGTGTCACTTCTGTGAGTGTCATTAATCCAGAAGGCGTGGAAACTGTGACTTT
AGCTACTGCTTCTAAAGACCGGACACTAAGGCTATGGAAGATCAATACTGAGGAGGCTAC
CAACCATCCTGCGAGGGTTAGAGCTTACAAAATCTTGCGTGGTCACAAGTCTTCTGTACA
GAGCGTTGCAGCACAGACTAACGGAGAAATGATTTGTTCCGGTTCTTGGGATTGCACCAT
CAACCTATGGCAAATCAATGACACTAATGCAGAAAATGATCTAGTGTCTAAGAAGAGAAA
AGTTGATGGTCGAGTTGAGGACTCTCAATTAGAGGGAGAAGCTTTTACAACCCTCGTAGG
CCATACACAGTGCGTGTCTTCTGTGATTTGGCCACAAAGAGAGTCAATCTATTCTGCATC
TTGGGATCATTCTATTAGAAAATGGGATGTTGAGAAAGGCAAAAATGTGACAGATATATT
TTGTGGGAAGGCTCTTAACTGCCTCGACATTGGAGGGGAAAGTTCTGCTCTGATAGCTGT
CGGTGGTTCTGACCCCGTTGTTAGGATTTGGGATCCTCGTAAGCCAGGCACGTCTGCTCC
TGTTTTTCAGTTTGCTTCTCATACTTCTTGGGTAACAACTGTCAAATGGCATGATAAGTC
TTTGTTTCATTTACTTTCTGCATCTTATGATGGGAAAGTTATGTTATGGGATCTGAGAAC
TGCGTGGCCTCTTTCAACCATTGAATCTCACAGTGACAAGGTACTGTGTGCTGACTGGTG
GAAAAGTGACAGTGTTATCAGTGGTGGTGCAGATTCAAAACTCTGCATTTCTTCACAGAT
TCCTTTACAGTGATGTACACGTCGATGATATCTCAGATACGAGTTTGAAGCCAATTTTGT
CCGAGGCACCAATACTAGTGTTTTATCCTATGTAACACCGATACTTCAGATTGAAGTCCT
GGTGTCAGAATCTGATCAATTGTAAACTGCTAATTATGTAAACCCTTAAAATTATGCATA
TCTTGTCTTGAACTCATTTTACTTATGTGTAGTACAATTAGTACCGCATTTGAATTATTT
ATGGTAGCGTGCTATTTAATTAGA
|
| EST members of Unigene |
BT052428 AL377909 AL377908 BF648867 EV260186 BG580391 AW685598 AW684660 AJ500102 AJ500072 BQ138076 BE203909 CB894463 EY477970 EY474038 GE348655 GE343431
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10260 F-box and WD-40 domain protein 7 |
| EC |
|
| Transcription Factor Family |
C3H |
| Transporter Classification Family |
3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase |
| Probeset |
Mtr.31741.1.S1_at, Mtr.51933.1.S1_at, Mtr.8994.1.S1_s_at
|
| Corresponding NCBI Gene |
831408
|
| Trichome-related Gene from Literature |
N/A
|