| Acc. |
TCMT52830 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum E-value=1e-30; E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana E-value=6e-28; E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana E-value=3e-21; E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis E-value=3e-20; E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis E-value=4e-20; |
| Length |
1482 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBC_GLOMUS (5 ESTs); MT_SEEDROOT_KV3 (3 ESTs); MT_DSTEM2 (3 ESTs); MT_NOD_GVN (3 ESTs); MtBA (2 ESTs); MT_DROOT (2 ESTs); MT_HOGA (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_JCVI-MT3 (1 ESTs); MT_ECELL (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MT_NOD_GVSN (1 ESTs); MT_NOD_ROOT (1 ESTs); |
| Sequence |
GAACCCACTTACTAAAAAAAAAAACTTCATTTCCTCTCCGAGTCAACAAAAAAAAAAAAA
AACTAAATGAACTCGGAAACTGAAACACCATCCTCAACGACGTCGTTTTGGTGCTACAGC
TGCACACGTTTCATTCACATCTTGAACCAAAACAACGTTGTTTGTCCTCACTGCCAAAAC
GGCTTCGTTGAAGAGATTCACGCCGGTCAATCACCGGCGGTTTCTCTTTTCGCCGACGGA
ATTCAGTCCTCCAGAAGACAAACCTCCCGCCGCAGACGTCGTAACGCCGGCGGCAGCCGT
TCGCCTTTTAATCCGGTGATCGTTCTCCGTGGACCTAGAGAAGACACCACCGCCGGTGTC
GGTGCAGACGCCGGCGGGGGTGATAGCGAGGGGAATACAAGTAGTTTTGAATTATACTAT
GAAGACAGTAATGGCACCGATCTACGTCCACTTCCACCAAGCATGTCGGAGCTATTACTC
GGTTCCGGCTTCGATCGGTTGTTAGAGCAATTCTCTCAAATTGAAATCAACGGTTTCGGA
AGGTCGGAGAATCCACCGGCGTCAAAGGCGGCGATAGAGTCAATACCAACAGTTGAAATC
ACCGATTCAGAAATGGAATCCGAAATTCACTGTGCAGTTTGCAAAGAACAATTCGAGCTA
GGTTCTGAAGCGCGTAAGATGCCGTGTAATCATCTTTACCATTCCGATTGCATTCTCCCA
TGGCTTTCAATGCGAAATTCGTGCCCGGTGTGTCGGCACGAGTTACCGTCCGATCAAAAC
GCGTCGGAGAGTAGAATTTCCGGTCAGATTGATGAAGAAGCGGTTGGATTGACAATATGG
AGGTTACCGGGAGGTGGATTTGCTGTTGGAAGATTTGCCGGTGGGCGGAGAGCCGGTGAG
ATTCAGTTACCGATTGTTTACACGGAGATGGATGGTAACAATTCAAACGAAGATTCTAGA
AGAATTTCTTTGACTGTGGGAAGTAATAGAGTTAGAGAGAGACGTGGAATTAGGAGAATT
TTTCGAAATTTTTTGTCGTTTTTTGGGAATGTTAATTTAAATCGTAGCTTTTCTGGTTCG
TTGTTTCGTAGAAGCTCAAGAAGAAGAAGCAGAACTTGGGTTACAGAAGAATAATGATTT
GGTTTTGTTTGGATTAAAACTTGAAAGCAAGTTATTCATTTAAATTTTAAATTCTTAATG
TAAATAGCATAAAATTGTGCTATAATTAAGTTTAGTAGATGATTATTGAAGGGTGCAAGA
TAAGGATTGTTGTTCTTGCTGATCAACAAACATATATAGTTGGGAAAGAAGCTATAAGTG
ATGCTTATTTAGTTTTTATTGTTGTTAATTAAATTTAGTTGATTCTTTTAATGTTTTTGT
AGTATTATGTCATACACACATTCTTTGTAAGAATCCCTCTAAGATTTGTTAATGTTGTAT
CCAATCTGATGACCATGTTATACCCATANCACACATCTTTAC
|
| EST members of Unigene |
CA922474 AL389213 AL389212 AL388086 AL388085 AL382118 BE319229 AW687513 AW689418 AW691162 AW688638 BF645861 DW015363 BE997723 BG583280 BG581419 AW981095 AW685561 BG645502 BG644794 AW774929 BG646624 AL368965 AL368964 EY477971
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.43266.1.S1_at
|
| Corresponding NCBI Gene |
836074
|
| Trichome-related Gene from Literature |
N/A
|