| Acc. |
TCMT52905 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Autophagy-related protein 8C OS=Oryza sativa subsp. japonica E-value=3e-53; Autophagy-related protein 8C OS=Oryza sativa subsp. indica E-value=3e-53; Autophagy-related protein 8a OS=Arabidopsis thaliana E-value=8e-53; Autophagy-related protein 8c OS=Arabidopsis thaliana E-value=1e-51; Autophagy-related protein 8b OS=Arabidopsis thaliana E-value=3e-51; |
| Length |
1247 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT2 (3 ESTs); MTAMP (3 ESTs); MT_JCVI-MT3 (2 ESTs); MT_GSEED (2 ESTs); MT_DLEAF (2 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_ECELL (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_DFLOWER (1 ESTs); MT_DSIL (1 ESTs); MT_HOGA (1 ESTs); MT_Drought (1 ESTs); |
| Sequence |
ATTATAGAAAAATTCAACTTTATTACAGTGTTGAAGATAACAATCAATCTTTACTTACTA
GAACTATAACAACTTAATTTACACAGAAACGAACGAAACCAAGAACAACAAGTTTTAGTG
TTTTACAGAGATGTAGAAAATCATTCTTTCCCTCCAAGTGTTTGAATAATTGCTTCCAAA
AGCTTAATATCGTTATCACGCTTCGTAATTTCTTCTTGCTTTGCACGCAGTTCTTCCATA
TGCAACTCAAACACCTTTGTGGTGTTTTCGAGTTCTTTGGTGACTTCAAGAGCGCGTAAT
TCAGCGGCTTTCTGTGACGCTTCCGCTTGACGTTTCTCGGAACGAGCGCGAGCGGCGGCG
GTGATGGCGGCGTCGAGTTCTCGTTCTAAAGTGTGGACGCGTTGATCGAGGAGTTTGATA
GTGCGGGCTTGATCGGCGGCGAGAGAGGCTTTAGAGAAAGTGTCGTCGTCGACGAAAACA
GCTTTGGTGAGAAGAAGCTTCTGGAGAGATTCGAGATTTGAACTCATTTCTGATAGATTT
GTCATCGCTCCGCTCCATCTTTCTCCTTTCGAATCCGAATCCATCTCACAACCCAAACCC
AAACAAACCCTAATTTCAATTCTTTATAAACTCTCACACAAACCTCAATTTCACTTCGAT
TCGATCCGATCATCCATTATTCTTTCATCTTTCATCTTTCATCAGATTTTTTCATCACTC
TTTCAATTTAATCATGTCTAAGGCTTCCTTCAAGACTCAACATCCTTTCGAAAGAAGACA
GGCTGAATCTTCTCGCATCAGAGAGAAGTATCCTGATAGAGTACCTGTGATTGTGGAGAA
AGCTGGAAGAAGTGACATTGCTGACATTGATAAGAAGAAGTATCTTGTCCCAGCTGACTT
GTCTGTTGGTCAATTTGTTTATGTTGTCCGGAAAAGAATTAAGCTCAGTGCAGAGAAGGC
TATTTTTGTTTTCATTGAAAACACTCTACCTCCAACTGCTGCTCTGATGTCTGCCCTTTA
TGAGGAACACAAGGATGAGGATGGCTTTCTTTACATGACTTACAGTGGAGAGAACACCTT
TGGTTCCTCCCACTAGGCATAATTTGAGATAACTTTCTTTCTGTAAATAGCTCCCATTTA
AGCAGTCCATTGTCAAATACATGGCAAATGCGTATTGTGATCCTACTCTTTGATTTACTT
TCGTAATCTTCAGCTATGAATTTCAAATTTTTAATCGATGAAGTATA
|
| EST members of Unigene |
CF068189 CX540239 CX539570 BF645497 DW016637 AJ502913 AJ502097 AJ501881 AW774259 BI270390 BE318214 BE318979 BF519516 CB894922 BG450480 EY478500 EY477785 GE351833 GE347434 GE343640
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04140 Regulation of autophagy > K08341 GABA(A) receptor-associated protein (autophagy-related protein 8) |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
1.A.9 Ligand-gated ion channel of neurotransmitter receptors LIC |
| Probeset |
Mtr.10526.1.S1_at, Mtr.40326.1.S1_at
|
| Corresponding NCBI Gene |
828287
|
| Trichome-related Gene from Literature |
N/A
|