| Acc. |
TCMT53184 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Sphingoid long-chain bases kinase 1 OS=Arabidopsis thaliana E-value=0; Sphingoid long chain base kinase 4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=1e-11; Sphingosine kinase A OS=Dictyostelium discoideum E-value=7e-11; Sphingosine kinase 2 OS=Mus musculus E-value=9e-11; Ceramide kinase OS=Mus musculus E-value=2e-10; |
| Length |
1805 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_SROOT_KV2 (2 ESTs); MT_TRI (2 ESTs); MtBC_GLOMUS (2 ESTs); MT_SROOT_KV0 (1 ESTs); MT_JAS_ROOR (1 ESTs); MT_HOGA (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_DSLC (1 ESTs); |
| Sequence |
GANTATTTCNGACAGATACCCCTCCTGAATTGCTCTTTAGATGCAAAACTCCGCCTAAGA
TGCTTGTAATTTTAAACCCACGCTCAGGCCGAGGTCGTTCCAGTAAAGTTTTCCACCGTG
ATGTGGAACCAATATTCAGGCTTGCTGGTTTTAGATTGGAGGTAGTTAAAACAACATCTG
CCGGTCATGCTAGAAACCTTGCATCAACTGTAGACATCAGCACTTGCCCTGATGGAATCA
TATGTGTTGGCGGTGATGGGATAATCAACGAGGTTGTTAATGGTCTACTTAGTAGAGACA
ATCAAAAGGAAGGAATATCTATACCTATTGGAATTATACCAGCTGGTTCTGATAACTCAC
TGGTATGGACTGTTCTTGGAGTTAGAGATCCTGTTTCTGCAGCAATGGCTATTGTGAAGG
GGGGCCTTACCGCTACAGATGTCTTTGCTGTTGAATGGATTCAGAATAATAAAATTCACT
TTGGATTAACAGTCTCATATTATGGTTTTGTTAGTGATGTGTTGGAACTTTCTGAAAAAT
ATCAGAAGCGCTTTGGCCCACTGCGGTATTTTGTTGCTGGATTTCTCAAGTTCTTATGCT
TACCGCGATACAGCTACGAAGTTGAATATCTTCCAGCATCAAAACCTGAAAAAGAAGGTT
CCGGTGAAAGGGAAGTAGTTGACATGTCGGAGCTGTATACCGACATCATGACCAGATCAA
ATAAGGATGGGATGCCCAGGGCATCTAGTCTTTCAAGTATTGACTCAATAATGACTCCGA
GTCGGATATCTGGTGGGGACCTGGATACCTGTAGCAGCACTCATGCTAGCACCGAACCTT
CTGAGTTGGTGCGTGGCTTAGATCCAAAGTCAAAACGCCTATCATCTGGAAGGAGCAATA
TCACAGCAGAGCCAGAAGTCATTCATCCCCAACTGCCTCTGTCAACAACTCCAAACTGGC
CAAGAACAAGATCTAAGTCAAGGAATGATAGAGGATGGGCTGGATTGACCACTACACATG
ATACCTCTAAATGGGGGAATGCAGCGAATGATAGAGAGGATATATCATCTACACTGTCTG
ACCCAGGTCCTATCTGGGATGCTGAACCAAAATGGGATCCAGAGGCTAATTGGGATGTGG
AAAACCCTATTGAGTTGCCAGGGCCACCAGATGATACAGAAGTAGGATCCACGAAGGAGG
TTGTGCCACGTTTTGGAGAAAAATGGGTTGTTTCAAAGGGACAGTTTGTTGGCATTCTGG
TTTGCAACCATGCTTGTAGAACTGTCCAGGGCTCTCAGGTGGTTGCTCCGAAAGCTGAGC
ATGACGATAACACTCTAGATTTGATCATGGTACATGGGAACGGAAGGCTGAGGCTGTTGA
GATTTTTCATACTTCTACAGATGGGTCAACATGTTTCACTGCCATATGTTGAATATGTGA
AGGTAAAGTCTGTCAGAATAAAGTCTGGGAAACACACTCACAGCGGATGTGGGATTGATG
GTGAGTTTTTTCCACTCAATGGACAAGTAATTTCTTCTTTGCTTCCAGAACAGTGCAGGC
TTATTGGTCGGTTCCGTATATGATTAGTGTGAGTTATTTTCAATTCTTTGACGGGTTTTG
GTAAGCTAGTGTACCTTTTCCTTTATGAATCCAGATACCTAATCTGTCTCGTCAAATACC
TTGTCGCTGTAACAGCTGAGCTTTGTAAATCTTTTTTATTTTGATTTCGTAAAAAGAAGA
AAAGTACACTGCACATTTCTACATTTTCTACAACAAGAAGCTGAATGTATTGCTAATCTC
CATTT
|
| EST members of Unigene |
AL383483 AL383482 EV254994 BF006349 BM779466 BM779174 BE203851 CX531930 BG646950 EX529617 ES612759
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Lipid Metabolism > ko00600 Sphingolipid metabolism > K04715 ceramide kinase;
Metabolism > Lipid Metabolism > ko00600 Sphingolipid metabolism > K04718 sphingosine kinase;
Environmental Information Processing > Signal Transduction > ko04020 Calcium signaling pathway > K04718 sphingosine kinase;
Environmental Information Processing > Signal Transduction > ko04370 VEGF signaling pathway > K04718 sphingosine kinase |
| EC |
2.7.1.138 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.38101.1.S1_at, Mtr.38102.1.S1_at
|
| Corresponding NCBI Gene |
832411
|
| Trichome-related Gene from Literature |
N/A
|