| Acc. |
TCMT59120 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) E-value=0; E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=0; Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) E-value=0; |
| Length |
1891 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DLEAF (4 ESTs); MT_JCVI-MT2 (2 ESTs); MT_GESD (2 ESTs); GLSD (2 ESTs); MT_JCVI-MT1 (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_JAS_ROOR (1 ESTs); MT_KVKC (1 ESTs); MT_MGHG (1 ESTs); MT_Drought (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_JCVI-MT3 (1 ESTs); MtBC_GLOMUS (1 ESTs); |
| Sequence |
GGAGCTGCAATTTTGAGAGTTTTGCAAGCCTTGAGTTCCCTTGTCACCTCACTAACTGAG
GATCATGGTGACACAGTTAATCCTGCTGCTCTTTCTGAGGTTTGGCAAATCAATTCAGCA
TTAGAACCATTGTGGCAGGAGCTGAGCTGTTGCATAAGTAAGATAGAGTCCTACTCTGAG
TCTACATCTGAGTTTGTCACCCCATCTAGTTCCTCTGCCTCTCAACCAGCTGGTACCATG
CCTCCACTTCCAGCTGGCTCTCAAAATATCTTGCCATTCATAGAATCTTTCTTTGTGGTT
TGTGAGAAATTGCATCCCGCACAGCCAGGTGCTAGTCATGACCAGAGTATTCCTGTTATT
TCTGACGTTGAGAATGCCAGTACATCTGAATCTCCGCAGAAAGTATCCGGACCTGCTGTG
AAAGTAGATGAGAAAAATATGGCTTTTGTCAAGTTCTCAGAGAAACATAGGAAGCTTCTA
AATGCTTTTATAAGGCAAAATCCTGGTTTGCTTGAGAAATCCTTCTTACTCATGCTGAAG
GTTCCAAGATTTATCGATTTTGATAACAAGCGCGCTCACTTCCGATCAAAAATTAAGCAT
CAGCATGACCATCACCATAGCCCGTTAAGAATATCTGTCAGAAGGGCATATGTTCTAGAA
GATTCTTATAACCAACTTCGCATGAGACCAACTCAAGATTTGAAGGGAAGGGTTGACTGT
TCACTTTCAAGGGGAGGAAGGTATCGATGCAGGAGGACTTACAAGGGAGTGGTATCAATT
GTTGTCCAGAGTTATTTTTGACAAGGGAGCACTGCTTTTTACTACAGTGGGCAACGAGTC
AACATTTCAACCAAACCCTAACTCTGTTTATCAAACAGAACATTTATCTTATTTCAAGTT
TATTGGTAGAGTGGTTGGTAAAGCACTATTTGATGGTCAACTTTTGGATGTTCATTTTAC
TCGCTCATTCTACAAGCACATACTTGGGGTCAAGGTTACATATCATGATATTGAAGCCAT
TGACCCTGATTATTTCAAAAATTTGAAATGGATGCTTGAGAATGATATCAGTGATGTTCT
GGATCTTACTTTTAGCATTGATGCAGATGAGGAAAAATTGATCTTATATGAACGGACAGA
AGTGACTGATTATGAGTTGATTCCTGGCGGACGGAATATCAAAGTTACTGAAGAGAATAA
GCATCAGTATGTTGATTTGGTTGCTGAGCATCGGTTGACAACTGCTATTCGACCTCAAAT
AAATGCTTTCTTGGAAGGGTTCAGTGAATTAATTCCCAGAGAGTTGATATCCATATTCAA
TGACAAAGAGCTTGAATTATTGATCAGTGGGCTTCCTGATATTGATTTGGATGACTTGAG
AGCAAATACAGAATATTCTGGATATAGTGCTGCATCGCCAGTTATTCAATGGTTTTGGGA
GGTTGTTCAAGGCTTAAGCAAAGAAGACAAGGCTCGCCTTTTGCAATTTGTAACTGGCAC
ATCCAAGGTGCCTTTGGAAGGTTTTAGTGCTCTTCAAGGAATTTCAGGCTCCCAGAAATT
TCAGATACATAAAGCATATGGAAGTCCTGATCACTTGCCTTCTGCTCATACTTGTTTCAA
TCAATTGGATTTGCCGGAGTATCCATCTAAACAACATTTGGAAGAAAGGTTACTGCTAGC
GATTCATGAAGCAAGCGAGGGATTTGGATTTGGTTAAGATTTGTATTTGTATTACATTTT
ATTTAGATTAGGAGTTTATTTCAGAATAGAATTGAGTGGTACAGGGGTTTGAATATTTTT
TAAATATCTTGTCTATATGTTGTACAGTAGTATCTTCGCAATAGAAAATGTCCCTTTGGC
AGTTTTTCAATTAACTGCTTTGCTCTGTTAT
|
| EST members of Unigene |
CA921997 AL386474 EV261066 CA990772 BI311945 BG645401 BG454763 BG453919 BE317846 BE318578 CA989560 CA989419 CX533032 BQ165617 BE941799 BE248197 EY476066 GE352697 GE348423
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10592 E3 ubiquitin-protein ligase HUWE1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
Mtr.43297.1.S1_at
|
| Corresponding NCBI Gene |
842036
|
| Trichome-related Gene from Literature |
842036
|