| Acc. |
TCMT41471 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Ribosome biogenesis protein BOP1 homolog OS=Chlamydomonas reinhardtii E-value=0; Ribosome biogenesis protein BOP1 homolog OS=Monosiga brevicollis E-value=0; Ribosome biogenesis protein bop1 OS=Xenopus tropicalis E-value=0; Ribosome biogenesis protein bop1-A OS=Xenopus laevis E-value=0; Ribosome biogenesis protein bop1-B OS=Xenopus laevis E-value=0; |
| Length |
2763 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_SEEDROOT_KV3 (4 ESTs); MT_DSTEM2 (3 ESTs); MHRP-root (2 ESTs); MT_INSECT (2 ESTs); MTUS_MIXTISSUE (2 ESTs); MT_JAS_ROOR (1 ESTs); MT_SROOT_KV1 (1 ESTs); MT_ECELL (1 ESTs); MtBA (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_Drought (1 ESTs); MT_DFLOWER (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_DLEAF (1 ESTs); MT_SROOT_KV2 (1 ESTs); MT_SROOT_KV0 (1 ESTs); MT_Shoots (1 ESTs); |
| Sequence |
CTGATTCGCCAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGC
GGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCTC
TCTCTCTCTCACCCTCTTCCACGATGAAGAAAAAGACGGTGGTGGAATCTGAGATGAAGA
AGAAGAAGAGCAATGAGAAAGAGGAAGCACCACCGCCTCCATCTGATCATGATGATTCCG
ACGACGATGACTCCGATGACAGTGTAGAAGTTTCCGACTATGATTCCATTTCCGAAGACG
AGGACTCTTCTGCAGATAGCATCGACGATGACGACTCTTCTGATTCTGACTCTGATTCTA
AATCTGAATTAGAAGATGAAGAAGGTGCTTCACCTACTACTCATCATAATGCCTCTGACG
ATTCTGACTCTCAAGACGAGGAGGAGGACGTTGTCGACTCAGAAGGTGGAAGTGAAAGCT
CTGATCTTCATCAGGAAGGAGGAGGAGCTGAGAGTGATTCATCTGAGGATGAGGTGGCTC
CTCGGAATACCATTGGAGAGGTCCCTTTGAAGTGGTATGAGGATGAACCCCATATTGGAT
ATGACATCAAGGGGAAGAAGATTAAGAAGAAAGAAAGGGAAGACAAATTGGGTTCCTTTC
TTGCAAATGTTGATGATTCTAAGAATTGGCGGAAGGTCTTTGATGAGTACAATGATGAGG
AAGTGGTGTTGACAAAAGATGAAATCAAAATGGTCCGCAAACTAATGCAGAATAAGGCAC
CACATTCTGACTTTGATCCACATCCGGATTATGTTGATTGGTTCAAATGGGATGATGCCA
AGCATCCATTGTCTAACGCACCCGAACCCAAACGAAGGTTCATTCCTTCAAAGTGGGAAG
CTAAAAAGGTTGTGCAGTATGTTAGAGGAATTCGCAATGGAACAATAACTTTTGACAAGC
CAAAGAAGGAGGATGATTCATATCTCTTGTGGGAAGATGATTCTGGTTTGACAGAAAAAG
CAAATCATTTGGCTTACATTCCTGCACCAAAGCAGAAACTTCCTGGCCATGATGAGTCAT
ATAATCCTCCTTTAGAGTATATTCCAACCCAAGAAGAGATTAATTCATATCAATTGATGT
ATGAAGAAGACCGCCCTAAGTTTATCCCACAAAGGTTTACATCTATGAGAAGCATCCCTG
CGTATGAGAATGCTATGAAGGAAAGTTTCGAACGCTGTTTGGATTTGTACTTGTGCCCTC
GAGTTCGAAGAAAACGTCTTAATATTGATCCTGAATCTTTAAAGCCAAAGCTTCCAAATA
AAAAGGAGCTTAAACCTTACCCCATAACATGCTATATCGAATATAAAGGCCACGAAGGTG
CAGTTACATCAATTTCTATTGAAGCTTCAGGGCAGTGGATGGCTTCAGGTTCAAGTGATG
GAACTGTCCGTGTCTGGGAGGTTGAAACTGGCAGATGTCTGAGACAGTGGGAGATTGGTG
AAGCTGTGAACTGTGTTACTTGGAATCCTCTGTCTGATATTCATATTGTGGCCGTCTCTG
CGGGACACGATGTACTTCTGTTAAACACTGGCTTGGGTGATGAAGAAGAACAGCAAAGGA
TCAAGGAGCTTCTCTTGATTGATTCACCAGAAGCATCAGATGAGACTGGCAAGAAAGCAC
CTAGTGTACGCTGGCTTAAAGATGATAAACATGATGGTATAAGGTTAAGGCATTTAAAGA
ATGTTACTTCTGTGGAATGGCACCGGAAAGGTGACTACTTTTCAACAGTGATGCCAGCGG
GTGAATCAAGATCAGTTCTGATTCACCAGTTGTCCAAGAAACTCTCACAAAAACTTCCTT
TCAAGTTACATGGACTTGCTGTTAGATCAACCTTCCATCCATCTCGTTCCATCTTCTTTA
TTTGTACAAAGAAGACTGTTCGTGTGTTTGATTTATTGAAGTCTAAACAAATAAAAAAGC
TTGATACCGGTCTCAAAGAAGCCTCGTCAATTGCAGTCCATCCTGGAGGTGATAATTTAA
TTGTGGGGAGCAAAGAAGGAAAGCTTTGTTGGTTTGATATGGACCTTTCGTCTAAACCAT
ATAAAGTTCTTAAGTGTCATCCAAAAGATATTAACAATGTTGTCTTTCATCGTTCATATC
CCTTGTTTGCTTCGTGCTCAGATGACTGCACTGCATATGTTTTTCACGGAATGGTTTATT
CTGATCTCAATAAAAATCCTCTTATTGTTCCTTTGGAAATTCTACGGGGCCATGCAAATT
CAAATGGGAGAGGAATATTGGACTGCAAGTTTCACCCCAGGCAACCCTGGTTATTTACAG
CTGGGGCTGACAAGATGATTAAACTTTACTGTCACCAATAAAAATATTTTGATAAATTCA
TGCATGATAGTCTAATGACATCTAAGAAGAAGCCCGTAACTCTATCCCCAATTTTGTTCC
CCAATTGTTAAACAGAAAGCTGAAGCCACTGTTGTCCCAAATTAAGGGGTAGGGGAGTTT
CTGTCTATAGTTTTGTTTATGGGAAATTGTTTGAGTTTGTTTTCTGAACATCACATTTAT
TTCTTTGAAGTTGAAATGCCAGGAATTTGTAGCTTACTTGAAATAGAACTGTAATTTAGA
TGTAGCATATATACAACTATTAGATATCAATTTTAAGAAATCCGATGGATGTTTTTCTTT
CTGAGAAATGTGACGTGGAGTTGGTATGGTAATTAATTGATCATGATTGGTCATTTTACT
TTC
|
| EST members of Unigene |
CF069473 CA919914 CX526023 BQ137122 BE325545 BF636652 BF646427 EV255447 BE239781 BE239779 BG645285 AW775009 AW736547 AW736280 BQ148864 BQ138200 BG453739 AW256893 BE204575 CX528789 BE203210 AL366980 BF632903 BI267867 BF640170
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Lipid Metabolism > ko00565 Ether lipid metabolism > K01062 1-alkyl-2-acetylglycerophosphocholine esterase |
| EC |
3.1.1.47 |
| Transcription Factor Family |
C3H |
| Transporter Classification Family |
|
| Probeset |
Mtr.25059.1.S1_at
|
| Corresponding NCBI Gene |
818629
|
| Trichome-related Gene from Literature |
N/A
|