Acc. |
TCMT41488 |
Internal Acc. |
|
Type |
TC/Unigene
|
Annotation (Top 5 hits in Uniprot_trembl) |
U5 small nuclear ribonucleoprotein 40 kDa protein OS=Homo sapiens E-value=0; U5 small nuclear ribonucleoprotein 40 kDa protein OS=Bos taurus E-value=0; U5 small nuclear ribonucleoprotein 40 kDa protein OS=Mus musculus E-value=0; U5 small nuclear ribonucleoprotein 40 kDa protein OS=Pongo abelii E-value=0; U5 small nuclear ribonucleoprotein 40 kDa protein OS=Dictyostelium discoideum E-value=0; |
Length |
1563 nt |
Species |
Medicago truncatula |
Belonged EST Libraries |
MT_DSTEM2 (3 ESTs); MT_GSEED (2 ESTs); MT_ECELL (2 ESTs); MT_JCVI-MT2 (2 ESTs); MT_JCVI-MT1 (2 ESTs); MT_SEEDROOT_KV3 (2 ESTs); MT_CDS (2 ESTs); MTFLOW (1 ESTs); MtBA (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MT_NOD_ROOT (1 ESTs); MTAMP (1 ESTs); MT_GESD (1 ESTs); MT_SIRRA (1 ESTs); MT_NOD_NOLLY (1 ESTs); MT_SROOT_KV1 (1 ESTs); |
Sequence |
CTGATTACGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACC
GCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGG
ATCGATTGAGGGAGGGAGTTAGGGTTTTGGGAGTCTCCCATTTCTGTTTCATCTTCAATC
TGACGAAATCTCCTGTTGACACCCAAGCCTGTACAAATTGAAGTTTGTTTAATTCAATTT
TAAGCAAAGGTCGTCATGCAAGGTTTTCCTGGTGAAAATGAACATGCTCTGTCAGTTGTT
GGTTCAAAGCCAATGGAATGGTCTACTGTGCCATACAATGCTCCTCGTGCTCCTGGGCCA
AATGGAAAGCAGCGGACCTCAAGTTTGGAATCTCCAATCATGTTGCTGACCGGGCACCAG
AGTGCTGTATACACCATGAAGTTCAATCCAACAGGATCAGTTGTTGCATCTGGATCGCAT
GACAAAGAAATTTTCCTTTGGAATGTGCATGGGGATTGCAAGAATTTTATGGTTCTAAAA
GGTCACAAGAATGCTGTTTTAGATCTTCACTGGACTTCAGATGGGACACAGATTATCTCT
GCCAGCCCGGATAAAACACTCAGGTTATGGGATACAGAAACAGGAAAACAAATCAAAAAG
ATGGTAGAGCATCTTTCGTATGTCAACAGTTGCTGTCCAACCCGGAGGGGGCCACCTCTT
GTTGTCAGTGGCTCTGATGATGGAACAGCAAAATTATGGGATATGCGTCAAAGGGGCTCC
ATCCAAACATTTCCTGATAAATACCAGATTACTGCTGTCAGCTTCTCTGATGCCTCAGAT
AAGATCTACACTGGTGGTATTGATAATGATGTCAAGATATGGGATTTGCGTAAAGGTGAG
GTTACCATGACACTTCAAGGTCATCAAGATATGATTACAAGTATGCAATTGAGTCCTGAT
GGTTCCTACCTTCTTACCAACGGCATGGATTGCAAGCTTTGCATTTGGGATATGCGCCCA
TATGCTCCACAAAATCGATGTGTGAAGATTTTGGAAGGGCATCAACACAACTTTGAGAAG
AATTTGTTGAAATGTGGCTGGTCACCTGATGGAAGCAAGGTCACAGCTGGGAGTTCTGAT
CGAATGGTTTACATCTGGGATACCACTTCTCGAAGAATATTGTATAAGCTACCTGGGCAC
AATGGATCTGTTAATGAGTGTGTTTTCCATCCCAATGAACCTATTGTTGGATCTTGTAGC
AGTGACAAGCAGATTTATCTTGGGGAGATATGAAGCACGGCATTTAGAAACTAGCAAAAT
GTAATAGCATGTTGGTACTTTTCACAATCATTAGGGAGTGTAGACCTAAGAAAACTTCTG
TTCATGAATGCATTCATAACATCAACTATATCCCTTGCTCATTCTAGGCCAAGCTCTTCC
CTTCTTAAAATACTTTAAATTGGAGAATGTGGATTCCTACACTGTAATATTCTGGCGGAA
ACGTTTGTCACCTACTTTTGTTGCTAATTAATGTTTTTCGGAAGAAAAAAAAAAAAAAAA
AAA
|
EST members of Unigene |
BT052746 BT052745 DY617928 CX542382 CX541973 BQ137151 AW695445 AW693574 BF649906 BF647299 EV261305 EV259556 DW017582 AW686065 AJ501741 BI309814 AW774749 AW736166 BQ155232 BF004479 AJ497777 AL369732 GE349524 GE344452
|
InterProScan Domain |
|
Gene Ontology |
|
KEGG Orthology |
|
EC |
|
Transcription Factor Family |
C3H |
Transporter Classification Family |
3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase |
Probeset |
Mtr.20729.1.S1_s_at, Mtr.51157.1.S1_at
|
Corresponding NCBI Gene |
818980
|
Trichome-related Gene from Literature |
N/A
|