| Acc. |
TCMT41567 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Putative E3 ubiquitin-protein ligase XBAT31 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase XB3 OS=Oryza sativa subsp. japonica E-value=0; Probable E3 ubiquitin-protein ligase XBOS31 OS=Oryza sativa subsp. japonica E-value=3e-94; E3 ubiquitin-protein ligase XBAT33 OS=Arabidopsis thaliana E-value=3e-29; Probable E3 ubiquitin-protein ligase XBOS35 OS=Oryza sativa subsp. japonica E-value=6e-29; |
| Length |
1791 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_PhoLEAF (4 ESTs); MT_JAS_ROOR (4 ESTs); MT_ECELL (4 ESTs); MT_GPOD (4 ESTs); MT_Drought (3 ESTs); MT_SEEDROOT_KV3 (3 ESTs); MTUS_MIXTISSUE (2 ESTs); MT_DLEAF (2 ESTs); MT_GSEED (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_DSTEM2 (1 ESTs); MT_HOGA (1 ESTs); MT_KVKC (1 ESTs); MT_NOD_GVN (1 ESTs); MT_NOD_ROOT (1 ESTs); MT_INSECT (1 ESTs); MHRP-root (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_DROOT (1 ESTs); |
| Sequence |
TGATTCGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCGC
GGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGCTT
CAGTCCAACCAACCAACTTACCAAAAACACCACCGTGTCCACCGCCGTATAAGGCGGCGC
GTGAGGAAGTTTCCGGCAACCACTTCTTCACGTGCTGCTTGTTGATATATTTAAGAGAGG
AAATGGGTCAGAATCAATCGAGTTGTGTGGTGGGGGTGCAGAAGAAGAAGAAAGAGAATA
GTGTGTTTGCTTCTGCTGTTGTGAATGGTGAGATGGAAATTGTTGAAAGTATGGTTGAGG
ATGATGTTGGTGTTTTGGATAGTACTGTTGGTCGTGCTAAGTTGTCTCCTCTTCATTTAG
CAGCTGCCAATGGTCGGATCGAGGTGCTTTCAATGTTGTTGAACCGGAATGTCAAAGTCG
ATGTCTTGAATCGTCATAAACAGACACCGTTAATGTTGGCTGTGATGCATGGAAAGACTG
GTTGCATGGAAAAGCTTATTCAAGCTGGAGCTAATATATTGATGTTTGATTCTATTCGAC
GAAGAACCTGCTTGCACTATGCTGCTTATTATGGCCATGTAGATTCGTTAAAGGCTATTC
TTTCAGCTGCTCATTCTTCACCTGTTGCAGAATCTTGGGGATTTGCTAGATTTGTGAACA
TAAGAGACGGAAATGGTGCTACGCCGCTGCACCTTGCTGCTCGTCATAGACGGCTTGAAT
GCCTTCATTCCCTGTTAGACAACGGGGCTCTTGTTTGTGCTTCAACCGGTGGATACGGAT
TTCCTGGAAGAACACCGCTACATATGGCGGCCCGTGGTGGTTCTGTGGACTGTGTCCGGA
TGCTGCTTGCTTGGGGAGCAGATAGGCTTCAATTAGATTCCTCCGGGAGAATACCGTTCA
CAGTTGCTCTTAAGAACAAGCATAGAGCATGTGCTGCCCTGCTCGATCCCTCATCAGCCG
CACCTCTTGTTTGGCCATCTCCACTAAAGTTCATCAGCGAGCTCAATCAAGAAGCCAAGG
CCTTACTGGAAAACGCCTTACTAGAAGCGAACAGGGAGAGAGAAAAGGCCCTATTAAAGG
AGAATGACATACCTTCATCTCCACTACGTTCTGATTGCAAGTATGACGATATTGTCTCAG
ATTCTGAGGAAAGCAATATGGAGTTATGTTGTATATGCTTCGACCAAGTGTGCACAATTG
AGGTCAAACCTTGTGATCATCAAATGTGTGCTCATTGTACCCTAGCATTATGCTGCCTCA
AGAAGCCTGATCCTGCAACCGGTTGCACGACCGGACCAGTTTGCCCATTTTGTCGGGGTG
CCATTCTTCAGTTAAATGTTGCCAAGATCAAGACTGACAGCGATACAGAAGTAGAATCCA
GTCCAACAAAACCAAGAAGATCAAGAAAATCAAATTTCAGTGAAGGGAGCAGCAGCTTCA
AGAGTTTGTCAGCCATTGGCTCATTCGGAAGGATTGCTAGTCGCAATTCAGGAAAGGTTG
ATGCCGAAAAGCAATGAGGGATTTCTTAAGTCTTGATGATTGCTGGTGGTTTCTTTGCTT
CCAATGACATAAATGGTGATTTTACACTTGCTGTGGAATAGCTACCTATTGTAGCATTTT
ATTTGAATTTCATTTTCCATTGTCCTTTCAGACATAGAAGTACTATATTTCTATATGGTC
TGTTTGAGTCTTTGTAATCCGGTTATCGGTTGAACTTTGACAGACATTTGT
|
| EST members of Unigene |
CA921872 CA921873 BE320118 CX540426 AW560874 AW695630 BQ136623 BQ135928 BQ135672 BG448329 AW980564 AW684446 BE239451 CB892173 CB891757 BG645838 BQ140884 BQ151398 AW682938 CA918222 CA917887 CA917391 BI308657 BQ158608 BQ158363 BQ158115 BE323604 CX531397 CX530683 CX530558 CX530109 CB893863 BQ164860 BQ144974 BQ144799 BQ144572 BQ142338
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
1.A.1 Voltage-gated ion channel superfamily VIC |
| Probeset |
Mtr.37338.1.S1_s_at
|
| Corresponding NCBI Gene |
817433
|
| Trichome-related Gene from Literature |
N/A
|