| Acc. |
TCMT42049 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Geranylgeranyl diphosphate reductase, chloroplastic OS=Nicotiana tabacum E-value=0; Geranylgeranyl diphosphate reductase, chloroplastic OS=Arabidopsis thaliana E-value=0; Geranylgeranyl diphosphate reductase, chloroplastic OS=Oryza sativa subsp. japonica E-value=0; Geranylgeranyl diphosphate reductase OS=Synechocystis sp. (strain PCC 6803 / Kazusa) E-value=0; Geranylgeranyl diphosphate reductase OS=Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003) E-value=6e-50; |
| Length |
1966 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_INSECT (14 ESTs); MT_VILEAF (13 ESTs); MT_Shoots (7 ESTs); MT_DLEAF (7 ESTs); MT_PhoLEAF (6 ESTs); GLSD (4 ESTs); MT_DSIL (3 ESTs); MT_Drought (3 ESTs); MT_JCVI-MT1 (2 ESTs); MT_DSTEM2 (1 ESTs); MT_BML (1 ESTs); MT_TRI (1 ESTs); MT_DSLC (1 ESTs); MT_GPOD (1 ESTs); |
| Sequence |
CTTATTGGGACAGCTCGAAATTTTTTCTCAGTAAAAGGAACAAAAGCTGGAGCTCCACCG
CGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATCAACCACCATGAG
CTCCATCGCCCTCAAATCCTTCCTCGGCCTCCGCATTTCCTCACCAGAAACCCCCCAATT
CTCCTACCGCCCCAAACCCATCACCCACCGCCGCAAGTTCACCGTCGTCGCTGCAGCAAC
CAGCCCAAAAATCGATGGCCGAAACCTCCGTGTTGCCGTCATCGGCGGTGGTCCAGCTGG
AGGTGCAGCAGCAGAAACACTTGCAAAAGGTGGCATAGAAACCTTCCTCATTGAACGTAA
AATGGACAACTGCAAACCATGTGGAGGAGCCATTCCTCTATGCATGGTTGGTGAGTTCGA
CCTTCCACTAGACATCATAGACCGCCGTGTTACCAAGATGAAGATGATTTCTCCGTCGAA
TGTCGCCGTCGACATTGGTAGGACACTTAAGTCTCATGAGTATATTGGTATGGTGAGGCG
TGAGGTGCTTGATGATTATCTTAGAAATAGGGCTAAGGAAAATGGAGCGAATATTATTAA
TGGGTTGTTTTTGAAAATGGATATTCCTAAAGAAAAGAATGCTCCTTATGTTCTTCATTA
TTCTTCTTATGATGGGAAAACTGGTGGGGTTGGTGAAAAAACTACTTTGGAAGTTGATGT
TGTTATTGGTGCTGATGGAGCTAATTCTAGAGTTGCTAAGTCTATTGATGCTGGTGATTA
TGAATATGCTATTGCATTTCAGGAGAGGATAAAAATCCCGGATGATAAAATGGCTTACTA
TGAGGATCTTGCGGAGATGTACGTGGGCGACGACGTTTCTCCTGATTTCTATGGTTGGGT
ATTCCCGAAATGTGACCATGTTGCTGTCGGCACCGGAACTGTGACACACAAGGGAGACAT
CAAGAAGTTCCAACTAGCAACAAGGAAAAGAGCCGAGGACAAGATCTTAGGGGGCAAGAT
TATCCGCGTGGAGGCTCACCCTATACCGGAACATCCAAGGCCACGAAGATTGTCAGGGAG
GGTCGCGCTTGTGGGTGATGCTGCTGGCTACGTGACCAAATGTTCCGGAGAAGGAATCTA
TTTTGCAGCCAAGAGTGGGAGGATGTGTGCAGAGGCAATTGTGCAGGGTTCGGCGAATGG
AAAGAGGATGGTTGAAGAAGGGGATTTGAGGAAATATTTGGAGAAATGGGACAAGACTTA
CTGGCCTACTTACAAGGTTTTGGATATTCTTCAGAAGGTGTTCTATAGGTCCAATCCTGC
TAGGGAAGCTTTTGTTGAAATGTGTGCTGATGAATATGTGCAGAAGATGACATTTGATAG
TTATCTGTACAAGACTGTTGTGCCTGGGAGTCCATTGGAAGATATCAAGTTGGCTATCAA
CACCATTGGAAGCTTGGTTAGGGCTAATGCTCTAAGGAGGGAGATGGACAAACTTAATGT
ATGACAACAATAGTCATTCATCACAGTCTGTCTGACTTGTATACATATTAATTTATCATT
CATTTTTGCTTTCGTAGTAAACATGATCTCTTATAAGTGTTAATTATCTGTGTAAGCAAA
CGGATTAAATTTTCATGCAATCCCAATATAGACTGGTGATTGGAGCATAGCAGGGGTTGA
TTGAAATTTGAAAGAACTTGTAAAAGTTTAAGAGATCAGACTACTTTGCATGTGGTATTT
ATCAGCTGGAATTTAAGAGATTTGATAAAAAACAAAATGAAGTGAAGTCTAAAGAGAAAG
AAGAAAAGGACGTAGTTGCACAGCAGAACATGTATGCTCAATTGTTACCTCTTGCTTTGC
CTGCCCCACCAATGCCTGGAATGGGAGGACCAGGTTATGGAGGAAGCTACGGGCCTCCCC
CTCCAGTGAGTGGAATGGGGATGCCCCAAATGCCTNCTTTTGGGAT
|
| EST members of Unigene |
CX527753 CX527075 CX525124 CX524981 CX524895 CX524750 CX524239 AW696446 EV260692 EV256942 BF005720 BG453690 AW683354 BE317439 BE318423 BE315793 AW683010 BE317426 CA918117 BF521428 BF518618 AW776128 BQ124655 BQ124600 BQ124446 BQ124427 BQ157928 BI263851 BG458065 BG457860 BG456936 BG456339 CX523566 CX523441 CX523439 CX522128 CX522093 CX520395 CX520148 CX519906 CX519593 CX519386 CX518973 CX518538 CX516547 BG451766 BF635775 BF632573 BI267695 BI267557 BI267450 BI267025 BI266799 BI266388 BI266193 BI265828 BG448850 BE322735 BE322643 BF641400 BF640837 BF640348 GD185267 ES612429
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.40232.1.S1_s_at
|
| Corresponding NCBI Gene |
843788
|
| Trichome-related Gene from Literature |
N/A
|