| Acc. |
TCMT42788 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
ABC transporter I family member 6, chloroplastic OS=Arabidopsis thaliana E-value=0; Probable ATP-dependent transporter ycf16 OS=Cyanophora paradoxa E-value=2e-80; Probable ATP-dependent transporter ycf16 OS=Guillardia theta E-value=3e-75; Probable ATP-dependent transporter ycf16 OS=Porphyra purpurea E-value=5e-75; Probable ATP-dependent transporter ycf16 OS=Odontella sinensis E-value=9e-75; |
| Length |
1458 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DSIL (4 ESTs); MT_HOGA (2 ESTs); MT_JCVI-MT1 (2 ESTs); MT_FLOSEED_MTY (2 ESTs); MT_NOD_GVN (2 ESTs); MTPOSE (1 ESTs); MT_Drought (1 ESTs); MT_INSECT (1 ESTs); MT_JCVI-MT3 (1 ESTs); MT_JCVI-MT2 (1 ESTs); MTUS_MIXTISSUE (1 ESTs); |
| Sequence |
GGAGTAAAGAGAAAAAAAAGAAAAAGAAAAAAAAAGGCACACTATCTAATCTGTTTCATC
ATAGCATAGCACATAACAGAATATCGCAGTAGTAGTGATGGCTGTTTCATCACTATCTCT
TCCATTTCACTTCCGTTCTTCTCCCAAATCACACACTCGCCGCAAATTCGTTTTCTTTGC
GGCGGCGAGCAGCGATGTTCCCCTCTTACAAGTCAACGATCTTCGAGCCAAAATCGTTGA
ATCCAATGCCGAAATTCTCCGCGGCGTTAATCTCACTATCAACAGAGGCGAAATTCACGC
TATCATGGGTAAAAACGGTTCTGGTAAAAGCACTTTCGCTAAGGTTCTTGTGGGTCATCC
TGATTATGAAGTTACCAGTGGTAGCGTTGTTTTCAAAGGGGAAAATTTGCTTGAAATGGA
ACCTGAAGAAAGAGCCCTTGAAGGTCTTTTCATGAGTTTTCAATCACCTGTAGCAATTCC
TGGCGTTTCCAATGATCAATTTCTTGTTATGGCTTATAATGCTCGGAGAAAGAAACTTGG
TCTTCCTGAACTTGGACCCCTTGAGTGTTTTTCTTATTTAATGGAGAAGCTACAACTTGT
TAACATGAAGCCTGACTTTCTCAATAGAAATGTCAACGAAGGGTTTAGTGGAGGTGAACG
AAAACGCAATGAGATCTTGCAGCTTGCAGTTTTGGGGGCAGATTTGGCTATTTTGGATGA
AATTGATTCGGGATTGGATGTTGATGCGCTCAGGGATGTGGCAAGTGCGGTTAATAAAAT
TCTTACCCCAGAGAATTCTCTGTTGATGATTACTCACTATCGGCGAATTCTTGATCTTTT
GAAACCCTCCCATGTCCATGTTATGGACAATGGAAAAATTGCAAGGACAGGCGACCTATC
TATGGTAGATGCAATTGAGGCAGATGGATATGAACCGGTCTCTGTTTTAACTTAATACAG
CTAGTATCAGCACCTTTTCTGACTTTGTTGTGAAATGGTGTGGCTGATTTCGGTTCAATT
TCATGCTGTCAAGTTGCACAAGTTGGTGTGAATGAGTATCCCCTTCAAGATCATAATTGG
GAATAGGCAGTACATAATTAGATGAGATGAAGGTCAAAAATTTCTTCAGAGGTACTTTTG
CATTGGGGGTGGAGGAATTATAGTTATATTTTTCATTTCGATTTGAAACCTTTAATCATT
CTGGTTTTTTGATATTAGAGTTTTTGCTCAAAACCCAGATGACAGTACTGTGCTGGGTTG
ATGTTCAGTAGTTGTATCTTATGGAATATATTCTTGTGCAAGGATGAGTTTAGGAAATTT
ATCATTGCCTCATTACTGGAAGCGTACTTGAATAGTATAATTGTGTAAACTGAGTACTAG
TGTAGTTCAATTATTTAATAAACTACAGCTTAGCTTGCCATGTTTCTGTGCACTCAACAT
TTTGTACTTTTTCTATAT
|
| EST members of Unigene |
CA920409 EV262620 EV254894 DW018097 DW017091 BG583478 BG580322 BF521365 BF520522 AW776617 AW775783 AJ498828 CB894158 BG646500 BF634750 BI266824 EY475280 GE347442
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Environmental Information Processing > Membrane Transport > ko02010 ABC transporters > K05655 ATP-binding cassette, subfamily B (MDR/TAP), member 8;
Environmental Information Processing > Membrane Transport > ko02010 ABC transporters > K05663 mitochondrial ABC transporter ATM |
| EC |
3.6.1.3 6.1.1.- |
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.1 ATP-binding-cassette superfamily ABC ABC-type importers (all from Bacteria and Archaea) |
| Probeset |
Mtr.1092.1.S1_at
|
| Corresponding NCBI Gene |
820236
|
| Trichome-related Gene from Literature |
N/A
|