| Acc. |
TCMT43348 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Zinc finger CCCH domain-containing protein 30 OS=Arabidopsis thaliana E-value=0; Zinc finger CCCH domain-containing protein 24 OS=Oryza sativa subsp. japonica E-value=0; Zinc finger CCCH domain-containing protein 56 OS=Arabidopsis thaliana E-value=0; Zinc finger CCCH domain-containing protein 50 OS=Oryza sativa subsp. japonica E-value=0; Zinc finger CCCH domain-containing protein 67 OS=Oryza sativa subsp. japonica E-value=0; |
| Length |
3027 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_PhoLEAF (4 ESTs); MT_KVKC (4 ESTs); MtBB_NOD (4 ESTs); MT_NOD_GVSN (3 ESTs); MT_SROOT_KV0 (2 ESTs); MT_SROOT_KV1 (2 ESTs); MT_Drought (2 ESTs); MT_Shoots (2 ESTs); MT_GPOD (2 ESTs); MT_JAS_ROOR (1 ESTs); MT_HOGA (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_INSECT (1 ESTs); MT_LEAF_PHOMA (1 ESTs); |
| Sequence |
AAATTCACTCTAAATTCTTCTTCTTCATTTCAATTTCATTTCATTTCAATTTCAAAAACG
TTACTCTCTTTCTCTCTCTCTCTCTCTGCATGATTCCTCGTTTCTATCAATGGAAGCTCT
GAAATGAATCTCTTCTTCACCAGATCTTGTTTTCTTCTTCCGATTCACTCTTCAACATTT
TCCATTCAGATTTTTTCTTCTACTTCATTGATTTTGAACCCGATCTTCTTCACAAACACT
CGTAATTGTTAATTGAAGGATGTGCGGTGGACCTGACAAATCAAAATCTATTGCAACGTC
ATCATCTTCCTCTTCATCTGCGGCTGAAGGTTCAAATACTGTCGAAGACATGAAAAATCT
AACTGTTCGTACTGATGATTCTTTTTCCAGCTTACTTGAACATGCTTCTAACAATGATTT
TGAAGATTTCAAGGTAGCTCTAGATAGTGATGCTTCACTTATTAATGAAGTTGGCTTCTG
GTATGTCCGTCAAAAGGGATCTAACCAAATTGTTCTTGAGCACCGAACCCCTTTAATGGT
GGCTGCTTCCTATGGGAGTATTGATATTCTAAAGCTTATACTCTCATATCCCGAGGCTGA
TGTTAATTTCTCCTGTGGAACTGATAAAAGCACTGCTCTTCACTGTGCTGCCTCAAGTGG
TTCAGTTAATGCTGTTGATGCTATAAAATTGCTTTTATCAGCTGGTGCTGATATCAATTC
TGTGGATGCTAATGGGAAACGCCCTGTGGATGTTATCGTTGTTCCTATTGTTGTTCCTCA
TAAGCTCGAAGGTGTTAAAACAATTCTTGAAGAACTTCTCTCAGACAGTGCTTCTGAAGG
ATCTGTGGATGATTGCTCTCTTCCCCTGTCTCTTATTTCATCGAGTCCTGGTTCATCTGC
CCCTTTATCATCTGCTGAAAATGGATCTCCATCCTCTCCTGTGGCTCCCAAGTTTACAGA
TACAGCTGTTAATTCTACATCAGAAAAGAAAGAGTATCCAGTTGACCCATCTCTTCCTGA
CATAAAAAACAGCATGTATGCCACAGATGAATTCCGCATGTATTCATTCAAGGTTCGTCC
TTGTTCTCGTGCATACTCTCATGATTGGACTGAGTGTCCTTTTGTGCATCCTGGAGAGAA
TGCTCGAAGGAGAGACCCTAGAAAGTTTCACTACAGCTGTGTGCCATGCCCTGATTTTAG
GAAAGGGGCTTGCCGACGTTCGGATATGTGTGAATATGCTCATGGAGTATTCGAGTGCTG
GCTACACCCAGCTCAGTATCGGACAAGGCTGTGCAAAGACGGTATGGGTTGTAACCGAAG
GGTGTGCTTCTTCGCTCACTCACCTGAAGAGCTGCGTCCGCTGTATGTGTCCACTGGTTC
TGCTGTTCCTTCACCCCGATCAGCTGCTTCTACTGCTAATGTCATGGACATGGCTGCTGC
TATGAGCCTTTTCCCTGGTTCACCATCATCAATCTCTTTGATGTCTCAATCACCCTTTGC
ACAGCCTCCTCTATCTCCATCTGCAAATGGCAATAATGCTTGGCCACAGCCCAATGTGCC
AGCTCTTCATTTACCAGGAAGCATTAATCAAACTAGTCGTTTGAGATCTTCTCTTAGTGC
CCGTGATATGCCACACGACGACTTCAACAATATGTTGCAAGACTTTGATGGGCAGCAGCA
GATACTAAATGACTTGAGCTGTTTCTCACAGCCCCGTCCTGGTGCTATTTCAGTTGGTCG
ATCTGGCCGCCCTAAAACACTAACTCCCTCAAATCTGGATGATCTTTTTTGTGCTGAGAT
TGCTTCATCTCCTAGGTATTCCGACCCCGCTGCGGCTTCTGTATTTTCCCCAACACACAA
ATCTGCTGTCTTCAACCAGTTTCAACAGCTTCAAAGCTCCTTATCACCCATCAACACAAA
TGTCATGTCTCCTACAAACGTAGAGCATCCCCTGTTCCACCAGGCTTCATATGGTCTCTC
TTCTCCTGGAAGGATGTCACCAAGAAGTATGGAAGCCCTATCTCCAATGAGTTCTCGGCT
GTCAGCTTTTGCTCAGCGTGAGAAACAACAGCAGCAGCAGCAACAGCTGCGTAGCCTCAG
CTCAAGAGAACTCGGTGCTAACAATCCTCTCTCAGCTGTTGGGTCCCCTGTTAACTCCTG
GTCCAAGTGGGGATCATCCCCTATTGGAAAAGCTGATTGGTCGGTAAATCCAAATGACTT
CGGTCAAACACAGAGATCAACTTCTTTTGAGCATGGAAACAATGGAGAAGAGCCTGATGT
AGGTTGGGTCCATTCCCTTGTCAAGGATCCCACACCTGAGAAGAAAGAGAAGCTTGCAGG
TTCCGGCCCAATTCCATCCGTTGAAAAGAATCCCAATCCTCAAGCGGACGGCATTGATCA
CTCTGTTTTGGGAGCTTGGCTCGAGCAACTGCAGCTGGATCAACTTGTAGTCTAGTCATT
CAATTTGACCCTTTTGCTACATTCTTGCTGTCATAGTTATTTAATTTAATTTCTTAAGGT
GCATATTCTTTTGGTGAATTTAAGCCCCCCCGAAACATGGAAGGAGGTTGGCTGCAAAGT
TCCTGAAGGATAATCGTTTTTTTCATTCCCTTTAATTTTTGTTATTCATTATTTCACATT
TTACCTAAAACTTCAGGGAGTGAGATAAAGAACTCTTTCTCTCTGAACTGTTTATGTTGT
CTACTAGAAAAAAAAATCCTGTAAGAGGTAAGGTATTCTTCCAAAACAGGATTCTTTTTC
TTATCATTTTACTTCATTAGTTTCTAAGTTCCTTTTCCTACATTGTATAAGATTCTGTCA
GTACATTTATGTTGCTTATGTAGGAAGTGGGACTGAGTTTCTTATGAAGGAATTTATGAG
TTATTGAATATTTATTGCAAGCTATATTTTAGAATACAGTATACTTTCTTCTTATGTTAT
TATTTTTTTAAGTGTATTGTGTTGTGTTATTATTATAAGCTTTGTTAAACTCTGATCATT
TTCAAAGTTCAAAACAATGTTTAGTTC
|
| EST members of Unigene |
CA920868 AL380384 AL380383 AL375229 AL375228 CX527758 CX524603 BE998436 AW208154 AW208149 BQ141274 CA918180 CA918174 BE204773 BE204725 BI263053 BG458103 BG456909 BE324889 CX529547 BG648531 BF004620 BF004619 BQ165311 BQ165310 BQ165309 BQ165297 BF634124 BF632760 BF641237
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
C3H |
| Transporter Classification Family |
|
| Probeset |
Msa.2565.1.S1_at, Mtr.15350.1.S1_at
|
| Corresponding NCBI Gene |
818790
|
| Trichome-related Gene from Literature |
N/A
|