| Acc. |
TCMT46889 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Homo sapiens E-value=2e-75; Putative U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Drosophila melanogaster E-value=9e-70; Activating signal cointegrator 1 complex subunit 3-like OS=Dictyostelium discoideum E-value=7e-54; Putative U5 small nuclear ribonucleoprotein 200 kDa helicase OS=Caenorhabditis elegans E-value=3e-51; Pre-mRNA-splicing factor brr2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=1e-44; |
| Length |
1353 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBC_GLOMUS (2 ESTs); MtBB_NOD (2 ESTs); MT_SROOT_KV0 (1 ESTs); MT_SIRRA (1 ESTs); MT_HOGA (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_Drought (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_DFLOWER (1 ESTs); MT_DLEAF (1 ESTs); MT_GPOD (1 ESTs); MT_DSIL (1 ESTs); |
| Sequence |
GAAAGGTTTGTTGGAGGTTCTGTCATCTGCATCAGAGTATGCTCACCTTCCAATACGACC
TGGGGAAGAAGAGGTGGTTCGTAGGTTAATCAACCACCAAAGGTTTTCCTTTGAAAACCC
AAAAGTCACCGGATCCTCATGTGAAGGCTAATGCCTTGCCTGCAGGCCCATTTCTCTAGG
CAATCTGTTGGTGGGAATCTATCATTGGACCAGAGGGAGGTACTGCTTTCTGCAAACAGG
CTTCTGCAGGCAATGGTTGATGTAATATCGAGCAACGGTTGGCTGAGCATGGCTCTTCTT
GCCATGGAGGTAAGCCAAATGGTAACCCAAGGAATGTGGGAGCGAGATTCTATGCTGCTA
CAGCTTCCACACTTCACAAAGGATTTAGCTAAGAAATGCCAGGAGAACCCAGGGAGGAGT
ATAGAAACGGTATTTGATTTATTAGAGATGGAAGATGATGAGAGACGGGAATTGTTGAAC
ATGACAGATTCTCAGCTTTTGGATATTGCTCGGTTTTGCAACCGTTTTCCTAATATTGAT
CTGTCATACGAGATCCTGGACAACGACAATGTGCGAGCTGGGGATGATATAACACTACAG
GTCACTCTTGAGCGGGATCTTGAAGGTAAAACAGAAGTAGGACCTGTTGATGCTCCTAGG
TATCCGAAAGCCAAGGAAGAAGGGTGGTGGCTTGTTGTTGGTGATACCAAAACCAACATG
CTGCTTGCAATTAAAAGGGTGTCGCTGCAGCGGAAGTTGAAAGCCAAACTGGAGTTTGCT
GCACCTGCTGATGCTGGAAAGAAATCCTATGTCCTCTACTTCATGTGCGATTCTTACATG
GGTTGTGATCAGGAGTATGGTTTCACTCTTGATGTTAAGGAAGCAGATGGCGGTGAAGAT
GAATGAAAAATTTCATGAAATCTGCAAATGAGGGGAGGATAATACTTCCATACTGAGTTT
TTATTTTGTTCTGGTAAGGAAGTAATTGCGTCTAGAAGGAGTTCAAGGATGTAACACTGC
AAGCGGATTGTGGAAATTTGTAATCTTTGAGTACTAATACATTAGGAAATGAAATGCAAT
AGTTTGAATATTGGAACAATGGAGCCTTTATGTTAATTTTCTTTAGGATTAATGGTGTCA
TTCAATGACCCAAGCCTTAATTTCCAATTTGGGATCCTGGAGAACTCTATGTCTTCATAC
ATGCTTTTATATGGTTGTGGAGACCTGCTGAATTTAGCTAATACTGTAGCTTGTACAGAT
GTTTGTATTGCAGCTTGGTTATCCAAGTTTATTTCCCCTATTTGATATATGACACTATGC
TTAGAGCCGTGACTAAGTAAGGAATGCGTTCGA
|
| EST members of Unigene |
CA920781 AL385690 AL385689 AL377855 AL377854 EV257840 BI271176 BG452664 CA917650 AW776870 BG604201 BQ153729 BG647114 BF632693
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
3.6.1.- |
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.5 Type II (general) secretory pathway IISP |
| Probeset |
Mtr.43443.1.S1_at
|
| Corresponding NCBI Gene |
838690
|
| Trichome-related Gene from Literature |
N/A
|