| Acc. |
TCMT52949 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana E-value=0; 4-coumarate--CoA ligase-like 4 OS=Arabidopsis thaliana E-value=0; 4-coumarate--CoA ligase-like 3 OS=Arabidopsis thaliana E-value=0; 4-coumarate--CoA ligase-like 2 OS=Arabidopsis thaliana E-value=0; 4-coumarate--CoA ligase-like 4 OS=Oryza sativa subsp. japonica E-value=0; |
| Length |
1903 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JAS_ROOR (3 ESTs); MT_ECELL (2 ESTs); MT_DSIL (2 ESTs); MtBA (2 ESTs); MT_INSECT (2 ESTs); MT_DSTEM2 (1 ESTs); MT_ROOTPHOS (1 ESTs); MHRP-root (1 ESTs); MT_DLEAF (1 ESTs); MtRHE (1 ESTs); MT_NOD_NOLLY (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_JCVI-MT3 (1 ESTs); |
| Sequence |
CAAAAGAGAAAAAGTTCACATGTGAGTGAATAAATGATGATATTGGACGGTACAAATAAC
ACATTTAGCTACACTAGCATATCAGTTTGATACTACACAAAACAAGATTAAGATTAAGAT
GGAGGTAAACGGTGAGAATAGGGATAGCAGAAGAGTGATCGATCCAAGAAGTGGGTTTTG
CAGCAGCAATTCAATCTTCTACAGCAAGAGAAAGCCCCTTCCACTTCCACCTAACCACTC
TTTAGATGCCACCACTTTCATCTCCTCCCGCGCTCATCACGGCCATATCGCCTTCATTGA
CGCCTCCACCGGCCACCAATTCACTTACCAACAACTCTGGCGATCCGTCGACTCCGTCAC
CTCCTCACTCTCCAACATGGGTATCCGTAAAGGTGACGTCATCCTTCTCCTCTCTCCCAA
CTCCATCTATTTCCCTGTTGTCTGTCTCTCCGTCATGTCCCTCGGCGCTATCATCACCAC
CACCAATCCTCTCAATACATCTGGTGAAATTGCTAAACAGATTGCTGATTCCAAACCTGT
TCTTGCTTTCACTACTCAACAACTCCTTTCCAAAATCACCCAAGCATCACCTTCACTTCC
AATCATTCTCATGGACACCAACAACAACAACAACAACTCATCATCATCTTCAACAACAAC
AACAACACTGGATGAAATGATGAAGAAAGAACCTGAGTTGAGTAGAGTGACTGAGCGCGT
CAACCAGAATGACACAGCCACATTACTCTACTCATCAGGAACAACAGGACCAAGCAAAGG
AGTAGTATCTTCCCACAAGAATCTAATAGCGATGGTTCAAGTTGTAATGGCTAGGTTCGG
TAAAGAACAAGAGACAAGAGAAACTTTCATATGTACTGTTCCGATGTTTCATATATACGG
TCTTGCGGTGTTTGCTATGGGGCTTCTTGCTATGGGTTCAACCATAGTTGTTCTCTCTAA
ATTCGAGATGCACGACATGCTTTCATCCATTGAAAAATTCAGAGCAACCTTCTTACCTCT
TGTGCCCCCGATATTGGTTGCTATGCTGAACAACGCAGATGCTATTAAGAGAAAGTATGA
TTTGAGTTCGCTTCATACGGTGGTTTCTGGTGGTGCTCCTTTGAGTAAAGAAGTAACGGA
AGGGTTTATTGAAAAGTACCCTAATGTAAGTATCTTTCAAGGTTATGGTTTAACTGAATC
CTCTGGAATTGGAGCTTCTACCGAGTCTTTGGAAGAGAGTCGTAAGTATGGTACGGCGGG
GCTTGTGTCTGCTTCCACGGAGGCTATGATTGTTGACACTGAGACTGCTCAGCCGTTGCC
CGTTAATCGGACGGGTGAGCTTTGGCTTCGTGGTCCCACCACTATGAAAGGTTATTTCAG
TAACGAGGAGGCAACCAGATCGACCATTACTCCAGAGGGTTGGTTAAAAACAGGGGATGT
TTGCTATATTGATAGCGATGGATTCTTATTTGTCGTCGATCGTTTGAAAGAGCTCATTAA
GTACAAGGGATATCAGGTCCCTCCAGCAGAACTAGAGGCTTTGTTGCTTACTCATCCTGC
TATTTTAGATGCTGCTGTCATACCGTATCCAGATAAGGAGGCTGGGCAGGTTCCAATGGC
ATATGTGGTAAGGAATGTGGGAAGTAACTTGTCCGGAAGCCAAGTTATGGATTTTGTTGC
AGAGCAGGTGGCTCCATACAAAAGAATTCGAAAAGTGGCATTTATATCTTCCATACCCAA
AAATCCATCTGGTAAAATTCTTCGGAAGGATCTTATCAAGCTAGCTACGTCTAAACTCTG
AACTCAGTTGAACTTTGTAAATGATAGTTTTCCATTGAATTTGGTTAAATGGCGAATACT
TTCAACCATCTATTTGGTTTGTCACAAAATTGTCTATTTGTAA
|
| EST members of Unigene |
DY618034 CA922483 BG447606 BF646933 BF645579 AW329094 BG588349 AW683316 BF518974 AW127376 CX530910 CX530909 CX530721 AA660600 AL367307 AL366514 BF641742 BF640115 EY478249
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Carbohydrate Metabolism > ko00650 Butanoate metabolism > K01896 medium-chain acyl-CoA synthetase;
Metabolism > Lipid Metabolism > ko00071 Fatty acid metabolism > K01897 long-chain acyl-CoA synthetase;
Metabolism > Biosynthesis of Secondary Metabolites > ko00940 Phenylpropanoid biosynthesis > K01904 4-coumarate--CoA ligase |
| EC |
6.2.1.12 6.2.1.3 |
| Transcription Factor Family |
|
| Transporter Classification Family |
2.A.1 Major facilitator superfamily MFS |
| Probeset |
Mtr.43421.1.S1_at, Mtr.9793.1.S1_at
|
| Corresponding NCBI Gene |
838639
|
| Trichome-related Gene from Literature |
N/A
|