| Acc. |
TCMT40514 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Transcription initiation factor TFIID subunit 6 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=3e-73; Transcription initiation factor TFIID subunit 6 OS=Xenopus laevis E-value=5e-62; Transcription initiation factor TFIID subunit 6 OS=Homo sapiens E-value=5e-60; Transcription initiation factor TFIID subunit 6 OS=Rattus norvegicus E-value=8e-60; Transcription initiation factor TFIID subunit 6 OS=Mus musculus E-value=8e-60; |
| Length |
2957 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DSTEM2 (4 ESTs); MT_JCVI-MT1 (2 ESTs); MHRP-root (2 ESTs); MT_TRI (1 ESTs); MT_NOD_ROOT (1 ESTs); MTAMP (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_SROOT_KV0 (1 ESTs); MT_JAS_ROOR (1 ESTs); MT_HOGA (1 ESTs); MT_CDS (1 ESTs); MT_SROOT_KV1 (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MtRHE (1 ESTs); MT_INSECT (1 ESTs); |
| Sequence |
CTGATTACGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACC
GCGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGGC
ATGACCGCATCCTTCATCCAACTAAACTAACACTAATCTCCCTCAGTCGCTACGCACTCA
CATCGCATCTCAAACTGCAAAGTGAGTGGTACTGGTAGGTGAATATGAGCATTGTTCCTA
AAGAAACAATCGAGGTTATTGCTCAGAGTATTGGGATTAACAATTTATCTCCTGATGTTG
CGCTTTCTGTTGCTCCTGATGTTGAATACCGTATGCGCCAGATCATGCAGGAAGCAATCA
AATGCATGCGACACTCTAAGAGAACAACTCTGACTGCAGATGATGTTGATGCTGCACTCA
ATTTGAAGAATGTTGAACCAATATATGGATTTGCATCTGGTGGTCCTCTACGATTCAAAC
GAGCTGTTGGACACAGAGATTTGTTTTATATTGACGACAAGGATCTAGACTTAAAAGATG
TCATTGAAGCTGCTTTACCAAAAGCTCCCCTTGATACTGCACTTACCTGTCACTGGCTTG
CCATCGAAGGAGTGCAACCTGCTATTCCAGAAAATGCTCCTGTAGATGTAATTTCAGCTC
CTTCGGATATCAAAAAGCATGAACAGAAGGATGATAACCTTCCAGTTGACATCAAATTAC
CTGTTAAGCATGTCTTATCTAGAGAGCTTCAGCTCTATTTTGATAAAGTGACTGAGCTAG
CTTTGAATGAGCCTGATTCGGTTCTCTTTAAAGAAGCATTAGTAAGTTTGGCTACTGATT
CAGGACTTCATCCATTGGTTCCTTATTTCACATGCTTTGTAGCTGATGAGGTTTCTCGTG
GTTTAAGGAACTTTCCACTTCTATTTGCCTTGATGCGAGTTGTTAATAGCCTTTTGCAAA
ACCCTCATATCCATATTGAACCTTATCTACACCAGTTGATGCCATCAATTGTAACCTGCC
TTGTTGCTAAAAGGTTGGGAAGTAGATTGACAGACAACCATTGGGAACTTAGAGACTTCA
CGGCTAACCTGGTTGCATCAATATACAAAAGGTTTGGACATGTTTATAGCAATCTACAGT
CCCGGTTGTCAAAAACATTGCTGAATGCATTCTCGGATCCAAAGAAGGCAATGACACAAC
ACTATGGTGCAATTCAGGGGTTAGGAGCACTAGGACCCAATGTGGTTCGCCTTCTTTTGC
TGCCAAATCTTGAAGCATATATACGACTTCTTGAACCAGAGATGCTTCTTGAGACACAGA
AAAATGAAATGAAAAGGCATGAAGCTTGGCGTGTTTATGGAGCCTTGCTGCGTGCTGCAG
GTCAATGTGTATACGTTTCGCTAAAGTTGTTCCCAGCTTTTCCATCTCCTCTCCCACATA
CTGTCTGGAAGACCAGTGCAAGTGTTCTTACTTCTCCACCTAATAAACGCAAGGCAAGCC
CTATGGAATTGGAGCAGCAGCCCCCTTTGAAGAAAGTAGATACTGATGGAGAGGTTAGTG
TAGTTCAGGAAAATTCTTCAGCATCTCATAAGGAAGAGGAGACAGTAACTCAAGCTTCTT
CAGCTGAGTTAAAAATTGGTGCAGCGTCATCATCTGGAGAGACGAAAAATAAGATCACTA
CAGATGGTGTAGTTAGAAGCAGTGGGGGTGATACTCAGGATAATAAGATCACTACAGATG
GTGTAGTTAGAAGCAGTGGGGGTGATACTCAGGATTTGAAGATCTCTTCTGTCCTAGCCC
ATATTTGGAAAGATGAGCTGAATTCAGGACGTGTCCTGACATCACTGGTTGAGCTGTTTG
GTGAAAACATCCTTTCATTTATTCAGAATCGTGAGATGTGCATGTTCTTGTAACCTAAGG
AAGATTATAGCAAAGTTTGTTCATGGTTAAACCATGGAAAACATGTGGGTAATATGTGAT
GTCGAGAACTAACTAATATCGCTTAGTATAAAATGTATAATTTTCTTTTTGTTGAATGAA
ATTTTAGCTTCACATGAAATTTATTTTGAAGCTTTAGGTGTCGGGTGTTAGAGCCTGTTG
GAAATTGAGGAACTGGAATGTAATGTTTGTGTAAAATGTCAAATTATATATATATTGCAG
CCATAACTTTCAATCATTCTCACAGTCACAAGTACAATACAATTCCTTTTGTGACAGATT
AAGATAGTTTAGTTCATGCATACATATGAAATTCGCAACATAAAACGGTATAACTAAGGT
GTTTTGATGGTAACATGAATAACAGAATAATGTTAAAATTCAATACTTGTAGAATTACTT
AAATCTTTGGCATGATCATAGTAGCATCTAAGCAGCCAATTTACTGGACTCTCTTTCAAC
AGCTATTTTTAGGATGCTGTCTTCTTCCAAGACCATTTGAATTGGCATGAAACCCATTCC
ATCTGCCATTGCAAGCATAATTTGCTTAGTTTCTTTCTTGAATTCTTCCAGATCAACCGT
GCCATTCAAGTTGTGATCGAACTGTATGAACAACGACTCATAAACACGAGCAAGCTCATT
TGGGTCTGAATCCACATCAATACCAAAGTGTGTTTCAAAAACCCTCAAGCTCCTGAGCTC
CTTCAACATCTCATCATAGGAGAGCAGACCATCCTTATTTGTGTCGAGCCGAGCAAACCG
ATTTCCTACCGAGCTATTAAATGCTTCTTCATCTTCAAGGAAATGGACAATTGTGGCACC
ATCCAAAATTTCTACACTCATCTTTCACTTCTACTTGATGTCAAAAATGGAAGGTAGTTT
GTATTGACAAATAGAGTTTTGCCTCGTGCCGAATTCCTGCAGCCCGGGGGATCCACTAGT
TCTAGAGCGGCCGCCACCGCGGTGGAGCTCCAGCTTTTGTTCCCTTTAGTGAGGGTTAAT
TTCGAGCTGGCGNATCA
|
| EST members of Unigene |
BT053132 CA920577 AW688056 AW688207 AW691161 AW689315 EV261278 EV261040 BQ137392 AJ502300 BE240485 BE239729 BG644466 BE204670 CX529686 BG648007 BE203250 AA660963 BF641946 EX529016
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Transcription > ko03022 Basal transcription factors > K03131 transcription initiation factor TFIID subunit D5 |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.40964.1.S1_at, Mtr.8915.1.S1_at
|
| Corresponding NCBI Gene |
839370
|
| Trichome-related Gene from Literature |
N/A
|