| Acc. |
TCMT43313 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Probable pectate lyase 1 OS=Arabidopsis thaliana E-value=0; Probable pectate lyase 15 OS=Arabidopsis thaliana E-value=0; Probable pectate lyase 8 OS=Arabidopsis thaliana E-value=0; Probable pectate lyase 20 OS=Arabidopsis thaliana E-value=0; Probable pectate lyase 10 OS=Arabidopsis thaliana E-value=0; |
| Length |
2255 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DFLOWER (8 ESTs); MT_DSTEM2 (5 ESTs); MT_Shoots (4 ESTs); MT_JCVI-MT1 (2 ESTs); MT_SEEDROOT_KV3 (2 ESTs); MT_GPOD (2 ESTs); MT_SROOT_KV0 (2 ESTs); MT_JCVI-MT3 (1 ESTs); MT_JCVI-MT2 (1 ESTs); MTAMP (1 ESTs); MT_DLEAF (1 ESTs); MT_SROOT_KV2 (1 ESTs); MT_CDS (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_PhoLEAF (1 ESTs); |
| Sequence |
GGAGTCCATTCAACAATTTATCTTTCTCTCTCTACCGACCCTTTTTCTTGTTTGTTTCTC
TCTCTTCAGCTTCCACATTCTTTTTCTTGTGCAAAGCAAAATTGTACTGAGAGAGAGAAA
GAGAGAGAGAGTGTGTGAGTTTTTTTGAACAACAATGGAGTTTTCTTCTTCAAAATGGGT
TTTCAATGTTTGTTTCTTTTTGTTGCTTTTTGTGTTCATTGTTCATGATGAAGCTATGGC
TTCATCACAGATCTCTCAGTTTAGCAATGTTGAAACTGAGACACATAGGTTACCAAGCTT
CAACGATTCATCAATGGCGGCAAGGGAAAAACAAGCTGAGAAATTGAATGAGCGTGCTGC
TGTGGCTAATCCAAAAGAGGTGGCTTCTATGGTTGAGATGCACATCCAGAACAGTACTGA
AAGAAGGAATCTTGGATTTTTCTCGTGTGGAACCGGTAACCCTATTGACGATTGCTGGCG
TTGTGACCGCAATTGGCAACAAAACAGGAAGCGTCTAGCAGACTGTGGTATTGGTTTCGG
TAGAAACGCCATTGGTGGTCGCGATGGAAAGTACTATGTTGTCACTGACCCAAGAGATGA
TGACCCTGTTAACCCTAGGCCAGGAACTTTGCGCCACGCCGTTATCCAAGATAGACCACT
TTGGATTGTGTTCAAGAGAGACATGGTTATTCAGTTTAAACAAGAGCTTATTGTGAACAG
TTTCAAGACAATTGATGGAAGAGGAGCTAATGTGCATATTGCTAATGGAGGGTGCATTAC
TATTCAGTATGTTACTAATGTTATCATTCATGGTCTTCATATTCATGATTGTAAACCTAC
TGGTAATGCTATGGTGAGAAGCTCAGAAACACATTTTGGTTGGAGGACTATGGCTGATGG
TGATGCTGTTTCTATATTTGGTTCAAGTCATATTTGGGTTGATCATAATTCTCTTTCTCA
TTGTGCTGATGGTCTTGTTGATGCTGTCATGGGCTCAACAGCTATAACAATCTCTAACAA
CCACTTCACCCACCACAATGAGGTGATTCTGTTGGGACACAGTGACTCCTACACAAGAGA
CAAGCAGATGCAAGTGACCATAGCTTATAACCATTTTGGAGAGGGTCTTATTCAGAGAAT
GCCACGGTGTAGACATGGTTATTTCCATGTGGTGAACAATGACTATACTCACTGGGAAAT
GTATGCTATTGGTGGAAGTGCTGACCCCACAATCAACAGCCAGGGTAACAGATACAATGC
TCCTGTTAACCCTTTTGCCAAAGAGGTAACTAAGAGAGTGGAAACAGCTGAAACTCAGTG
GAAAGGTTGGAATTGGAGATCAGAGGGAGACTTATATCTAAATGGTGCATATTTCACAGC
ATCTGGTGCTGGAGCTTCAGCTAGCTATGCAAGAGCCTCTAGCTTAGGAGCAAAATCTTC
TGCAATGGTTGGTACAATGACTTCAAATGCTGGTGCACTAGGCTGCAAAAGAGGACGTCA
GTGCTAACAAAAATTCCAAGGAAACAAACAACCATTTTTCTGTGTTTGATTTTTCAGTTT
TTCTTTCTTCTTTTTTACCATATGATAGTATCATATGTCATATCCATTGCTTATTTTTCA
TCAGCATCATATCCTGCATTCTTGACAAGTGTACATTTATTACACATGTCACTATGTTAT
TATTGTGTGTCAAAACCAAAACCAAAACCTTAGCTGCTCAACTTGCTCCAGCTGCAAACA
AACAATGTAAAATTGTAGGAGCAGGTGCAGAAGCGCTTCTCTACTTTTCTACCTTTTGGT
TCTTCACACCTCATTTCATCACCAACCTTACCCACCAAATTCATATGCATATTTTTCCAT
ATGTCAAATCATGTCTCCCTTACACACTTGTTCAGTCCTTTTCAGTTTTATTTTATAGGA
TTTGAATATCAAGAACAAGAAGCCAAGTTATATATATAATTTTACTTTTTTTTTTTACTT
TATCTTTTGCTATTTTTTTACCTTTTGTTTTGTTTGAGTTAATTATACAAGAGAAAAAAG
TATGATTGTCAAAGTTGAGTAATGGAAACACTTTATCTATTATGGTGATTATGGAATAGA
AATAGTTGTGTTGTTGTTGTTCACTTTTTACCTTTTTGTCACTTTTTTTTAGCCTTTGTT
TTCTTTCATTGGCAATGGAAGTAATCTTTGCTTTTTGTTATGCAATTATNGGTTGTAAAT
CATTAACATAGTATCTGTCAATGTTGCATTTCTCT
|
| EST members of Unigene |
BT050680 AW560832 CX528261 CX528139 CX527835 CX526265 AW691528 AW694409 AW691795 BE325901 AW691965 EV262222 EV261255 AJ502836 CB892447 CB891213 BQ148911 BQ148827 BQ148154 BQ147956 BI271772 BI271593 BI271474 BI270324 AW683073 CA917830 CA917820 BM780042 BE204564 BE203667 BG455121 EY476226 GE347172
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.8573.1.S1_at
|
| Corresponding NCBI Gene |
839452
|
| Trichome-related Gene from Literature |
N/A
|