| Acc. |
TCMT43420 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Signal recognition particle receptor subunit alpha homolog OS=Drosophila melanogaster E-value=2e-96; Signal recognition particle receptor subunit alpha OS=Mus musculus E-value=9e-93; Signal recognition particle receptor subunit alpha OS=Homo sapiens E-value=9e-93; Signal recognition particle receptor subunit alpha OS=Bos taurus E-value=2e-92; Signal recognition particle receptor subunit alpha OS=Canis familiaris E-value=1e-91; |
| Length |
2273 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DROOT (3 ESTs); MT_NOD_GVN (3 ESTs); MtBB_NOD (2 ESTs); MT_ECELL (2 ESTs); MT_NOD_GVSN (2 ESTs); MtBA (2 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_DFLOWER (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MTPOSE (1 ESTs); MT_SROOT_KV0 (1 ESTs); GLSD (1 ESTs); MT_KVKC (1 ESTs); MT_JCVI-MT2 (1 ESTs); MT_GESD (1 ESTs); MT_TRI (1 ESTs); MHRP-root (1 ESTs); |
| Sequence |
AACAAACCTAACCAAATCTGAAATAATAAAACTCCAATTTCATTTTTAATTCTTAACTTA
ATCCAATTTTCATTTTATTTTTCTTTCCTCAACAAAACGCATAAAACCCAAACCCAGGTA
TCATGTTAGAGCAGTTACTGATTTTCACAAGAGGAGGATTAATCCTCTGGTCATGCAATG
AAATTGGTAACGCTTTGAAAGGATCACCGATCGATACATTGATTCGATCTTGTCTTCTAG
AGGAGCGATCTGGTGCGTCATCTTACAATTACGATGCACCTGGAGCTGCTTATTCTCTCA
AATGGACTTTCCACAATGATCTAGGTCTTGTTTTCGTTGCTGTTTATCAGCGAATTCTGC
ATCTGCTTTATGTGGATGATTTGCTTGCTGCTGTTAAGCGTGAATTCTCGCAGGTTTATG
ATCCCACCCGAACTGTGTATCGTGATTTTGATGAGATCTTTAAGCAGTTGAAGATTGAAG
CTGAGGCTCGTGCTGAGGATTTGAAGAAATCGAATCCGGTGATTGTAGGTGGGAATAGGA
AACAGCAGGTGACATGGAAGGGAGATGGATCTGATGGGAAGAAGAATGGAAGTGCTGGTG
GTGGTTTGAAGAATGATGGTGATGGGAAAAATGGGAAGAAGAATTCTGAGAATGACCGTT
CTGCTATTGTGAATAACCGGTAACCGGTTATAATTTGAGGAGTAACCGGTGTTGTTGGTA
ATGTTAGTGTAAATGGTAAAGAGAATGATAGTGTAAACAATGGAGCTTTTGATGTAAATA
GGCTCCAGAAGAAGGTTAGGAATAAAGGTGGGAATGGAAAGAAAACAGATGCTGTTGTAA
CCAAAGCTGAGCCGAAAAAGGTGGTTAAGAAAAATAGGGTTTGGGATGAAAAACCCGTTG
AAACTAAATTAGATTTTACGGATCATGTTGATATTGATGGGGATGCGGATAAGGATAGGA
AGGTTGATTATTTGGCTAAGGAACAAGGGGAAAGTATGATGGATAAAGATGAGATTTTTA
GTAGTGATAGTGAGGATGAAGAGGATGATGACGATGATAATGCTGGGAAGAAGAGCAAGC
CTGATGCTAAAAAGAAGGGTTGGTTTTCATCTATGTTCCAGAGTATTGCTGGGAAGGCCA
ATTTGGAGAAGTCGGACTTGGAACCAGCTTTGAAAGCTCTGAAGGATAGACTCATGACCA
AGAATGTGGCTGAGGAAATAGCTGAGAAGCTATGTGAATCAGTGGCAGCAAGTCTTGAAG
GCAAAAAACTGGCTTCATTTACAAGGATATCTTCCACAGTGCAGGCGGCAATGGAAGACG
CACTGGTTCGTATTTTAACTCCTAGGCGTTCTATTGACATATTGAGGGATGTTCATGCTG
CAAAAGAGCAAAGGAAACCATATGTTGTTGTATTTGTTGGAGTTAATGGAGTTGGAAAAT
CTACTAATCTTGCTAAGGTTGCTTACTGGCTTCAGCAACACAACGTTAATGTCATGATGG
CTGCTTGTGATACATTTCGATCAGGAGCTGTTGAGCAGTTGCGGACTCATGCACGCAGAC
TTCAGATCCCTATATTTGAGAAGGGTTATGAAAAAGATCCTGCTGTTGTGGCAAAAGAAG
CAATTCAGGAAGCTTCACGGAATGGTTCGGATGTTGTGCTAGTCGATACAGCTGGTCGTA
TGCAGGATAATGAACCATTGATGAGAGCACTGTCAAAGCTGATCTACCTTAACAATCCTG
ACCTTGTCTTATTTGTTGGAGAAGCACTGGTTGGCAATGATGCAGTTGATCAGCTTTCAA
AGTTCAACCAGAAACTGGCTGACCTCTCCACATCTCCTACACCCAGATTGATTGATGGGA
TCTTGCTCACAAAGTTTGACACTATTGATGATAAGGTGGGAGCTGCACTTTCAATGGTTT
ACATATCTGGAGCTCCAGTCATGTTTGTGGGATGCGGACAGTCCTATACTGACCTCAAGA
AACTCAACGTCAAGTCCATTGTGAAGACGCTCCTTAAATGAAAGGATGAAACTAAACTAT
TTTAGTTTCGGTCGTGAGACTCTTCTCTTCACCTGTGACCTGTCATGAATGTTTTCAGTT
TGCAAGTTACTTGATGATCCTTGTTAATCCTATTACTCTGTAGGCCAAACTATGTGGCTA
TGACTTTGGATGCAGTTTGGTTTGTTTATTTTGGAAAGCTTTCTTCCCCCCCTTTATCTA
TTTTGGAAAACTTAATATATCCCAATATATAAAAATGTTTTCCTGTTTGTTTC
|
| EST members of Unigene |
AL378785 AL378784 AW687629 AW687425 BE319454 BF650673 BF650271 BE999305 BE999304 BG582784 AW574274 AW573810 BI310405 BE240493 AW774833 BI271018 BQ138758 AJ498996 BE204688 CA989846 BQ165529 AL371979 AL371182 GE347975 ES611875
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko03060 Protein export > K03110 signal recognition particle receptor |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.5 Type II (general) secretory pathway IISP |
| Probeset |
Msa.1385.1.S1_at, Msa.2609.1.S1_at, Mtr.51805.1.S1_at
|
| Corresponding NCBI Gene |
829183
|
| Trichome-related Gene from Literature |
N/A
|