| Acc. |
TCMT52743 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase TRIM21 OS=Mus musculus E-value=7e-07; E3 ubiquitin-protein ligase TRIM21 OS=Homo sapiens E-value=2e-06; Tripartite motif-containing protein 40 OS=Rattus norvegicus E-value=4e-06; Tripartite motif-containing protein 40 OS=Mus musculus E-value=6e-06; E3 ubiquitin-protein ligase RNF4 OS=Rattus norvegicus E-value=6e-06; |
| Length |
1292 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_SIRRA (7 ESTs); MT_DFLOWER (4 ESTs); MT_GSEED (3 ESTs); MT_JCVI-MT1 (3 ESTs); MT_CDS (2 ESTs); MT_JAS_ROOR (2 ESTs); MTUS_MIXTISSUE (2 ESTs); MtBB_NOD (2 ESTs); MT_KVKC (1 ESTs); MT_Drought (1 ESTs); MT_INSECT (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_ROOTPHOS (1 ESTs); MT_SROOT_KV2 (1 ESTs); MT_SROOT_KV0 (1 ESTs); |
| Sequence |
CTTTCATTAAGATCTATATAATTCCTTCGTATTACACAATCCTTTCCTCTTCCGTTCAGA
TTATTATATTAACCTTTTCGCTCTCACAATTTCTTCTTCTTCTTCACACCCCTCAACGAT
TTCGCCACAGGTTTTGAGTTTGGATTAAGCAAAGTATTGGTTGGAATATGAGCACTCGGA
CAAGCAGGGTGCCTGTTGGTATCAGAACTAACCGGCGGAGGAAGGCAGCTATTGATCTTG
ACCTTAACCGAGTACCGGCTGCTGAACATTCAACTGCTCGGAATCCGATTGCTGAGAATC
CATCTGGTGAGAATCGTGAGCAGGAGAGGCGTTTGACTCAGTTGGGGCCTCAAGAAGTTG
AAGTTCAAGCTAACCAGCAACAGGAAGTAGAAGTTCAAGCTAATCAGCTACAGCTAGTTG
CGCAACCTGAACCTACTTTGATTGATGTGGAAGCCATTGATGACGACGATGTTGTTTTAT
CTTCCCCGAGGGCTTTTGCTGAGGCCAAAAACAATTCTCGAAGAAATCGTGGAAGGACTG
TAGTTGATGTCGATTTAGTCATGTTTTTTGCAGAAGAGCAGATTAGGTTAAGCAACAATA
ATCGCAACAAACGCAGACGAGAATCTCCAAAACGATCAATTTTCAACTGTGATCTTTATA
TAAATTTGGACGCCAGCAGCAGCAATACGATGGAAAGTGTCAAAAAGCCACCTGAGCCTC
CAAAGGAACCTGTCTTCACCTGTCCTATATGCATGGGCCCTATGGTTGAAGAAATGTCAA
CAAGGTGTGGTCATATTTTTTGCAAGTCGTGTATCAAGGCTGCTATAAGTGCTCAGGCAA
AATGTCCCACCTGTAGAAAAAAGATTACTGTGAAAGAGCTTATAAGGGTGTTTCTGCCAA
CAACTGCTTGAGGGTTTCAATGCAAGCTGAGCTGGTTATGGGGATTGGAAGAAAGTTGTA
GTTTCAGAGATTACTGGGTGGTTTTGTTGTTTTAAGTAGCTATTTATCTTTGTTTAATTT
ATCATTTATCATTCACATATATGAAGATCTTTGGTGGATACAATTCCTTGCTCAGTTTTT
TTTTTTTTGAGCTTTCATGTTCTGAAATCTGAACCTTTCGTCTATCTTTTTTTTGGTGGA
TGATACACTGCTAGAAAAGCCAGTTGTGATCTAATATCGATTCCAGGGATTTATGTATGT
ATATTAAATCCTTGAGTTTATTGGTAGAATTCCTTTGATTCCCCGTTAATGCAACATTTT
GCCAGTATGAATTGCTATCTGCTTTAGTTATC
|
| EST members of Unigene |
BT053405 BT051183 CF068430 CA919108 AL380833 AL380832 CX540888 CX539272 CX538548 AW559464 EV261279 EV257274 EV254984 AW171711 BQ149221 BQ149217 BQ146340 BI271186 AW257008 BE203759 BQ157072 BQ156520 BQ155931 BQ154921 BQ153485 BQ153035 BI269385 CX533561 CX529423 BQ255279 BF636336 BI266293
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Environmental Information Processing > Signal Transduction > ko04330 Notch signaling pathway > K06058 deltex |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase |
| Probeset |
Mtr.12452.1.S1_s_at, Mtr.43227.1.S1_at
|
| Corresponding NCBI Gene |
834923
|
| Trichome-related Gene from Literature |
N/A
|