| Acc. |
TCMT55850 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
RING finger and CHY zinc finger domain-containing protein 1 OS=Homo sapiens E-value=2e-67; RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus E-value=2e-66; Uncharacterized RING finger protein C2F3.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=3e-63; |
| Length |
1500 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT1 (4 ESTs); MT_SIRRA (3 ESTs); MT_ECELL (3 ESTs); MT_GESD (3 ESTs); MT_Drought (3 ESTs); MtBB_NOD (2 ESTs); MT_FLOSEED_MTY (2 ESTs); MtBA (2 ESTs); MT_DLEAF (2 ESTs); GLSD (1 ESTs); MT_PhoLEAF (1 ESTs); MT_VILEAF (1 ESTs); MT_JAS_ROOR (1 ESTs); MT_HOGA (1 ESTs); MT_KVKC (1 ESTs); MT_NOD_GVN (1 ESTs); MT_JCVI-MT3 (1 ESTs); MT_DSIL (1 ESTs); |
| Sequence |
GATTGTTGTGTTGTGGATCAAGCCAAAACGATTCTCAACACCAAAACAAAATCTCCTCTC
ACCCTTCCTTCCCTCTCCCATCCAAAACTCATGGAAGCCTCTGCCATTGAACGTCTTGAT
TTTGGGAAGATGGGATATGGGTGTAAGCATTATAGGAGAAGATGCAGGATTCGTGCTCCT
TGTTGCAATGAGGTTTACTCTTGCCGTCATTGTCATAACGAGGCAACGAGCATGCTGAAA
AACCCTTTTGATCACCACGAACTTGTTCGTAATGATGTTGAACAAGTTGTTTGTTCGGTT
TGTGACACAGAGCAACCAGTTGCTCAAGTTTGCACTAACTGTGGTGTCAGAATGGGAGAA
TATTACTGTGACCTCTGCAAATTCTTTGATGATGATACGGGGAAACAGCAGTTTCATTGC
GAGGATTGTGGGATCTGCAGAGTTGGTGGGAGTGAGAATTATTTCCATTGCAAGAAGTGT
GGGTCTTGCTACTCAGTTGCTCTGCGTGATAATCATTTATGTGTGGAGAACTCCATGAGG
CATCATTGTCCAATTTGTTACGAGTACCTGTTTGACTCATTGAAAGATACAACTGTTATG
AAATGTGGCCACACAATGCATTGTGAATGTTACCATGAGATGATAAAGCGTGACAAGTAC
TGTTGTCCAATATGTTCCAAGTCGGTGATTGACATGTCTACTGCATGGAAGAGAATCGAT
GAAGAGATCGAAGCAACTGTCATGCCTGATGATTATCGGAATAGAAAGGTTTGGATACTT
TGTAATGACTGCAACGATACAACCGAAGTTTCCTTCCACATTATTGGGCATAAATGCGGT
CACTGCAGTTCATATAACACTCGTGCTATTGCTCCTCCTGTTCTTCCACAATAACCGAAT
TCTCGCAGTTCACGAAGCATGTCTTTGCCCTATGACCCAATTGTTGTAGAGACTCATTTA
ATTCATCCTCAAGATTAGTGGTGTATTGTGTATGCCCTGAAACTTTTCATAGGTTATTCT
TCCTCCAATGTATGGAGTGGACAAGTTGGAGCTGGTATTTGAGTCATTAGACTATTATAA
ACATCTGTATACTAAATACAACATGGGGGAAAAAGCTTTACCCTGCATGAGCTGATGATA
ATTGTGTTGTGTCGTCTACTGTTGTATTGGATAGTGGAGGCCATATGCTGATTGATATTG
TAGGCCTTCATAGAAATCCTTTGTGATTGATTTGTTATGTTGCATTTTTACTATCATATA
GAAAAGGAATTTGGATCCACTGCAGTCAACATTTACCTCATAAATGCATTCAGGGACATC
TGTGACCGACCGTCCGATCCTGACCAGATGGTTCAAAGAAATGCAGATTTTAATTATTAG
TTTATTATTCAAGATACTGAGCTCGAATCTTGGACCATCCGATCTTGAATGCGAGGAATG
TTGATTACAGGAGACCCGGGTCCATATAGAAGCGTGATCTCTGACACTCATTTCAACACT
|
| EST members of Unigene |
AL379976 AL379975 BF650010 BF648759 BF644856 EV261812 EV260659 EV259700 EV256416 DW019196 DW016961 AW980379 CA991198 CA990864 CA990854 BG454647 BE249366 BE124219 CA989726 BG457009 BQ157463 BQ157180 BQ154515 CX519826 CX530345 BG648753 BQ165359 AL371997 AL371996 BF636462 BF634060 BF632409 EY476380
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10144 ring finger and CHY zinc finger domain-containing protein 1 |
| EC |
|
| Transcription Factor Family |
C2H2 |
| Transporter Classification Family |
|
| Probeset |
Mtr.10581.1.S1_at
|
| Corresponding NCBI Gene |
831983
|
| Trichome-related Gene from Literature |
N/A
|