| Acc. |
TCMT40440 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Protein transport protein Sec61 subunit alpha OS=Dictyostelium discoideum E-value=0; Protein transport protein Sec61 subunit alpha isoform 2 OS=Mus musculus E-value=0; Protein transport protein Sec61 subunit alpha isoform 2 OS=Homo sapiens E-value=0; Protein transport protein Sec61 subunit alpha isoform 2 OS=Bos taurus E-value=0; Protein transport protein Sec61 subunit alpha OS=Harpagifer antarcticus E-value=0; |
| Length |
1681 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_GSEED (3 ESTs); MT_JCVI-MT1 (3 ESTs); MtBB_NOD (2 ESTs); MT_HOGA (2 ESTs); MtBA (2 ESTs); MT_SEEDROOT_KV3 (2 ESTs); MT_PhoLEAF (1 ESTs); MT_SIRRA (1 ESTs); MT_Shoots (1 ESTs); MT_KVKC (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MT_Drought (1 ESTs); MT_NOD_ROOT (1 ESTs); MHRP-root (1 ESTs); MtSNF (1 ESTs); MT_SROOT_KV0 (1 ESTs); |
| Sequence |
GGAAAAGGAGGGACTATTTCTTATATCTCTCCACTCACCGGGATCTTCGTCGTCTTCCCG
TTCTGCTAATTTCTCTCAGGTTGAATTGACATAGTTTGATAAGATGGGTGGTGGGTTTAG
GGTGCTTCACTTAGTAAGACCGTTTCTCTCGTTCCTTCCTGAAGTTCAGACTGCTGACAG
GAAAGTGCCATTTAGAGAGAAGGTCATATATACTGTGATCTCTCTTTTCATTTTCTTGGT
CTGCAGTCAGCTTCCTCTATATGGGATACACTCGACAACAGGTGCAGATCCGTTCTATTG
GATGCGTGTTATCCTTGCTTCAAACCGTGGAACTGTCATGGAGCTTGGAATCACTCCTAT
TGTCACTTCTGGGCTCGTCATGCAGCTTTTGGCTGGATCAAAGATTATTGAAGTGGACAA
CAATGTGCGAGAGGATCGGGCCCTTTTAAACGGAGCACAGAAGCTACTTGGTATTTTGAT
AGCTGTCGGAGAGGCAGTTGCCTATGTTCTTTCAGGGATGTATGGTAGTGTGGGCCAACT
TGGAGTTGGAAATGCTATCCTCATCATTGTCCAGCTCTTTTTTGCGGGTATTATTGTGAT
TTGTTTAGATGAGCTTCTTCAAAAAGGATATGGTCTAGGTTCGGGAATTTCCCTATTCAT
AGCGACTAATATCTGTGAAAACATTATATGGAAGGCATTTAGTCCCACCACCATTAACAG
TGGACGTGGAGCTGAGTTTGAAGGTGCTGTTATAGCTCTGTTCCATTTGTTGATAACTAG
AACAGACAAGGTTCGTGCTCTTCGTGAGGCATTTTACCGGCAGAATCTTCCCAATGTGAC
AAATCTCCTTGCTACTGTCTTGATCTTCCTAATTGTGATATACTTCCAAGGTTTCCGTGT
GGTTTTGCCTGTAAGGTCAAAGAATGCTCGTGGACAGCAGGGTTCGTATCCAATCAAACT
GTTCTATACCTCCAACATGCCCATTATTCTACAGTCTGCTCTTGTTTCCAATCTCTACTT
TATCTCCCAGCTTCTCCACCGTAAGTACAGTGGAAACTTCATCGTAAATCTGTTGGGGAA
ATGGAAGGAATCTGAATATGGAGGTGGTCACTCAATTCCCGTTGGTGGTATTGCATACTA
TATCACTGCACCTTCCAGTTTAGCTGATATGGCAGCCAATCCTTTCCATGCTTTGTTCTA
TCTTGTGTTTATGCTATCTGCATGTGCCTTGTTCTCTAAAACTTGGATTGAGGTCTCTGG
TTCATCTGCTAGGGATGTTGCAAAGCAATTGAAGGAACAACAAATGGTGATGCCTGGACA
CCGTGAATCGAACTTGCAGAAAGAGCTAAACCGATACATCCCCACTGCTGCAGCATTCGG
AGGCATTTGTATTGGTGCTCTGACAGTGTTGGCAGATTTTATGGGAGCAATAGGTTCAGG
GACGGGGATTTTGCTTGCAGTAACGATCATCTATCAGTACTTTGAAACATTTGAGAAGGA
AAGAGCCAGTGAGCTTGGCTTCTTTGGTTTCTAAGTTCCGCCAAGCAATCACTTTTGTTT
TGGCACTTACCCTTGTACTGTACTTTAGATCGTTGAAGACAAAGAGTAGTTTTTTCTTTT
GCATATTTTATCAACTGAGGAATTAAACATATCATAGTATTTTTTTTGTTTGGATTTTCT
C
|
| EST members of Unigene |
AL376289 AL376288 CX541463 CX539550 CX539138 CX527511 EV262460 EV262120 EV259805 DW016666 AW686726 BE240232 AW736707 AW736706 AJ845380 AW225619 BG456958 BQ156411 CB894692 CB894511 BQ255385 AL367818 AL367817 BG451712
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.5 Type II (general) secretory pathway IISP |
| Probeset |
Msa.1579.1.S1_at, Mtr.48946.1.S1_at
|
| Corresponding NCBI Gene |
817986
|
| Trichome-related Gene from Literature |
N/A
|