| Acc. |
TCMT40607 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin ligase BIG BROTHER-related OS=Arabidopsis thaliana E-value=1e-14; E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana E-value=9e-13; RING finger protein 44 OS=Danio rerio E-value=2e-10; RING finger protein 44 OS=Homo sapiens E-value=4e-10; E3 ubiquitin-protein ligase RLIM OS=Homo sapiens E-value=4e-10; |
| Length |
2596 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DSTEM2 (3 ESTs); MT_SROOT_KV1 (3 ESTs); MT_GPOD (2 ESTs); MT_NOD_ROOT (2 ESTs); MTAMP (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_DFLOWER (1 ESTs); MT_DROOT (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_DSIL (1 ESTs); MT_Shoots (1 ESTs); GLSD (1 ESTs); MT_VILEAF (1 ESTs); MT_ECELL (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MtBA (1 ESTs); MT_NOD_GVN (1 ESTs); |
| Sequence |
TGATNACGCCAAGCTCGAAATTAACCCTCACTAAAGGGAACAAAAGCTGGAGCTCCACCG
CGGTGGCGGCCGCTCTAGAACTAGTGGATCCCCCGGGCTGCAGGAATTCGGCACGAGAAG
AATCATCATTCATCATCATCATCCTCAGAACTCTCACCCACCCATTTCAATTCAGGATCT
CTTTTCCTCTGGTGGGATAACCTTGATTTTGATGCAAGGTCAAAGGAGGACTATTGGGTC
CTTCCCAACAATTGTTAACATGATGCAAGGGCCTAGTTCTAACGGCACTGATATGAATCA
TCAGTCTTCCTTGAATCATGCGCAAAATGCAGTAGATTTCCGGCTGTCAGATTATAGGGG
GTCTTCTGGTGAGACTGCATGTTTACGTGGTACTGGTCCTAATGTGAGCTTTAATGGCTG
GAATACCGGTGAACCCAGTTCTGGACTGAATCTGGTCAACCAAGTCAACGATGATGGTCT
AAAATCTGAACAAAGGTTGTCTTCGTCATGCAGTGCTATTGCTGAGGATGGTCTAAGACC
CGAGGAAAGGCAATTACTTGGGAACCAATCCAGAATTCATCCTTCCTTTTTGCAAGGTTC
CAGCTCCAATCATACAGCCCAAGGTATTAATTTTGGTATGGAGCACATTGCTAACTCATC
TGATCGCGGGAAAGGTAAAGAAACTGGTAGCGGTGTTAATAACAACGATCCTTTTGGATT
AGATAGAGAGAAGACATCAATTGGCAGTTCTTCATTCAACCAAACAGGTGCTTCATCAGC
AAGCTCTGGGTACATGGCATGGGGAGATAGTGGCAGTTCAAGTTCTTCTTTAGCTAATTG
GGGTCCTTCCTGCAAAAGAAAGGCCCTTGAAGATAGTTCTATGCAACTGTGTACTGGAGG
AAGCTCGAGTTCCCTTGTACAATCTGAAAATGGTTACTGGCTTACTGATTCTGTTGATCT
TAATGTTCCTGGAAGCTTAGGTGATTTGTCACCTTTAGAGGATTTCCGTGTTACTAGCCC
TCCATTTCAGCAGAATACAAGAAATGAAGTGAGACAAGAAGCTTCCAATGCGTTTCCTTC
AATGGTAAGTATTGCGGAAAATGTGGAAAGGCCTCTACGAAACTTTGATAGGAGAATGAC
CCATCTACATCATCCGGAATCTGTACCTCTCAATTTAACATCAACAGGGAGTGCTAGACA
TCATAATTATCCTTCTCCGCATCAAATACCCGGCTCTCTCTCATTTAACGAATCCTTGGA
TTTAAGGTTAGCAGCTGGAGTAACAGCTGCTAATTCTGCTGTGCCGCAAAACCAGTCACC
ATCCCTGCACATGCATCCTTTTCCGTGGAATAGAGCTGCTAATCCTAGAGTGGCCAGATC
TTCAAGTTCTTATAGCTCAGGAGAAAGAGCAGTACGTGATGATTTTAATTTAAGAATCTT
CCCAAGAGATAGTACCGAGCATCCCATGAACATGCCTGCATCTTCAGGACATGAACCTGC
AGGTTGGTATTCATCTTCTAGTAATTTGAACAATGCTGGAGGCATACCTCCTCCATCCTG
GATTGGATCTAGTTCAAACGTCCACTCGTTACCTAATCCTAGCTGGACATTTAACCATGA
AGTCCCAACAGAAAATCTACAGAGAGTTTCAGAGTTCAGTCCCTGGTCCCTTTTTCCTTC
AATCAGCTCAGCATCTGGTACTCATAATGGTCATTCCTCCTCTACTTCCGGCCCTCCTTC
ATTTTCTCAGGGTTCTAGTAGTAATCAACCACATCCAAGACCATCATTTATGACGGAAAG
AAGGGGGTGGTGATGTTCTCTCTGCTCCTCATTCATTGCGAACATTACCCTTTGACAATG
AGGGGAGACGCCGGCTCATATCTGAGATTCGCCAAGTCCTGCTAGCAATGCGGAGGGGTG
AGAACTTACGAGCTGAGGATTATATGCTCTTTGACCCTTTCCTATATCATGGCATGGCTG
AAATGCACGACAGACACAGAGAAATGCGCCTTGACGTTGATAATATGTCTTATGAGGAAT
TGTTGGCATTGGAGGAGCGTATAGGAGACGTAAGCACTGGACTGAGTGAAGATATAATTA
ATAAGTTGATGAAACAGCGATTTTACATGTCTCTCATGACAGAGTCTTCTTCTGATCTCG
AACCTTGCTGTATCTGTCAGGAGGAATATGTTGATGGACAAAATCTCGGTTTGCTAGATT
GTGGGCACGAGTTCCACAGTAACTGCATCACACAGTGGCTAATGCAGAAGAATCTGTGCC
CAATTTGCAAAACAACGGCCTTGGCCTCGTGACGAGGAGAATCTCTCCCTCTTCACATAT
CATTTCCATTTATCAGTTTTTATCTTTTGTTGGTTCTATCTATTACTTTGTTTTATTCAA
TGAACTTCCTCTCATCTTAGATTGGGAACGAAAACACACATAAAAAAATAGACATAAAGA
AATATTGGTGGTTAAGCTCTATAGTAGAATTACATTTATACTGTGATAATGGACAATTAC
ATGTCCTTTATGATATCTAAAAGCACTTGAATTATATTATTGATTTTCATTATAAGTTTA
AGACTGTTGACCGCTG
|
| EST members of Unigene |
CA921731 BE319897 AW559304 CX528321 AW688520 AW690020 AW687998 BF649651 DW018917 AW573757 AW686794 AW684128 AJ503281 BG645652 BQ146778 CA917454 BI308458 BF520814 CA858427 CX517324 BF004629 BF004628 BF004487 AL366056
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.16959.1.S1_s_at, Mtr.25820.1.S1_at
|
| Corresponding NCBI Gene |
829550
|
| Trichome-related Gene from Literature |
N/A
|