| Acc. |
TCMT41082 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana E-value=9e-25; E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana E-value=4e-09; E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster E-value=8e-08; RING-H2 finger protein ATL81 OS=Arabidopsis thaliana E-value=9e-07; |
| Length |
1549 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_HOGA (5 ESTs); MT_ECELL (4 ESTs); MT_PhoLEAF (3 ESTs); MtBB_NOD (2 ESTs); MT_GSEED (2 ESTs); MtBA (2 ESTs); MT_GESD (2 ESTs); MT_DLEAF (1 ESTs); MT_GPOD (1 ESTs); MT_IROOT_DSIR (1 ESTs); MT_SROOT_KV2 (1 ESTs); MT_DSTEM2 (1 ESTs); MT_NOD_GVN (1 ESTs); MT_ROOTPHOS (1 ESTs); MHRP-root (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_DFLOWER (1 ESTs); |
| Sequence |
CACACAAAACAAAAGCCCCTTTCCCTCTTTCTTCCTTCCTTCTAGGGTTTTCTCAATTCA
CTTCTCGATTTTTCGATTTTCTCAATGGACGAGGTTCCTGTGATTGAAGAGAATGAGACG
AAGTCTGAGGCGCATTTGACTTCAGCTGCTGCTTTTGTTGAAGGTGGAATTCAGGATGCT
TGTGATGATTCTTGTAGTATATGTCTTGAAGAATTCATCGACAGTGATCCTTCTACGGTG
ACAAGTTGCAAGCATGAGTTTCATCTTCAATGTATTCTCGAATGGTGTCAGAGGAGCTCC
CAGTGCCCCATGTGTTGGCAATCTATCAGTCTCAAGGATCCAACGGGCCAGGAATTGCTC
GAGGCAGTTGAGAGAGAGCGGAACATTAGGTTCAATCCGACTAGAAATGCCACAATATTT
CATCATCCAACACTGGGGGATTTTGAGTTACAACATTTGCCAGTTGGAGCAAATGATGCT
GATCTTGAAGAGCGTATTCTCCAACACTTTGCTGCTGCAGCAGCAATGGGGCGAGCACGC
CATATTGCTAGAAGGGAAGGCCAGAGAAATAGGTCATCAGCTCAAGGTCGCCCACAGTAT
ATGGTATTTTCAGCTCATCCTAATTCACCTCCCATGGCTCCTGCTTCTTCCTCCCCACCT
CAGAGAGGGGATGGTGAACAGACTCCTGCGACCGGAGAAGAACCACCACAGCTCACTTTA
GTTCCTCCAGTTCAAACCGACCAGGTTTCTGCTTCAGGATCTGGGTCTGCTGCTCTTGCT
ACTGACAATCTGGGATTATCTTATAACAGCAGGAGATCTCCTAATCAGTCTTCTCCAAGT
AGCCAAGACAGAGCAGGACCATCAGAACTCCAGTCATTTTCAGAATCTCTGAAATCTAAA
CTAAATGCCGTGTCTACAAGATACAAAGAGTCAATTTCTAAGAGCACAAGAGGGTGGAAG
GAAAGGTGGTTCTCTCGGACTAGCCCTATGTCTGATCTTGGATCTGAAGTTAAGCGAGAA
GTTAATGCAGGGATTGCAACTGTGTCACGCATGATGGAACGCTTGGAGACCAGAGACAAT
AATAGAAGCAGTAGTGATACTGCTCCAAGTAACTTAGCAGATGGCCCAATTCAGGGATCA
AGTGATCAGCATTTAACAGACACTGAAAGGGACAGTCCTTTGAGAGACAATAACTCAAAA
ACATCTTGCACTGCAGGTTCCAGTTCAAATTAAGCATATAGAAGGAATTGCTTGAACTCA
GATCTGTTTTGTCCTAAAGGTAGAAATAGAGTTTCCCATTACTGGATATGAAATACCGTG
GATGTGGTGCATTGCCTATTGGCTGATAATCCTTTTACCTACAAAAGATGACCAACAATT
CTCATATTGGAAATAAAGAACTTAAGAAAAAAAGATGCAATGGTGGTCTCATTTGTTTTA
AACTCAGTAACCTTAATGTGATTGTATATTCAGTTCACCTTGTAAACTTATAGATATTCC
TTAGATAATCTTTATACATAAAACGTGTCTCTTCTACCTAGAGATAAAT
|
| EST members of Unigene |
CA922198 AL375087 AL375086 CX540223 CX539799 AW559709 AW692824 BF647334 BF646441 BF646010 BF644348 BE124888 AW329186 BI312386 BI310032 BE240477 BG645447 BI270407 BG452787 CA918315 BM779023 BG457364 BG457354 BG456327 CB893536 BG648277 BG648272 BG647828 BG647767 AL367992 AL367991
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
6.3.2.- 6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.21524.1.S1_at
|
| Corresponding NCBI Gene |
832260
|
| Trichome-related Gene from Literature |
N/A
|