| Acc. |
TCMT41112 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
U-box domain-containing protein 72 OS=Oryza sativa subsp. japonica E-value=0; Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana E-value=0; Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana E-value=0; Pre-mRNA-processing factor 19 OS=Bos taurus E-value=0; Pre-mRNA-processing factor 19 OS=Rattus norvegicus E-value=0; |
| Length |
2000 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_Shoots (4 ESTs); GLSD (4 ESTs); MT_JAS_ROOR (4 ESTs); MT_SEEDROOT_KV3 (3 ESTs); MT_INSECT (3 ESTs); MT_DSTEM2 (2 ESTs); MT_ECELL (2 ESTs); MT_NOD_GVN (2 ESTs); MT_NOD_ROOT (2 ESTs); MT_KVKC (2 ESTs); MT_DFLOWER (2 ESTs); MT_NOD_NOLLY (2 ESTs); MTUS_MIXTISSUE (2 ESTs); MT_DLEAF (2 ESTs); MT_SROOT_KV0 (1 ESTs); MT_PhoLEAF (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_SIRRA (1 ESTs); MT_Drought (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_JCVI-MT3 (1 ESTs); MtBC_GLOMUS (1 ESTs); MT_SROOT_KV2 (1 ESTs); |
| Sequence |
CTCTTCGGCTTCGTTTTCTCGTTACCACCATTTCCCTCTCTCTTCTCCAAAACCCAAAAC
CCTAATTTCTTCTTCCTCAACCACGATGAACTGCTCCATTTCTGGTGAGGTTCCAGATGA
GCCTGTGGTGTCAAAAAGCTCTGGGCTTTTGTTCGAGAAGAGATTAATCGAGAGGCATAT
AATGGATTTTGGTAAGTGTCCAGTTACAGGAGAGCCACTTACTATGGATGATATTGTGCC
GATCAAAACAGGCAAGATAGTGAAGCCTAGACCAGTGCAGGCAGCAAGCATTCCTGGCAT
GCTTGGAATGTTCCAAAATGAATGGGATGGGTTGATGCTATCTAATTTTGCATTGGAGCA
GCAGTTGCATACAGCAAGGCAAGAGTTAAGTCATGCTCTATACCAGCATGATGCTGCTTG
CCGCGTGATTGCAAGGCTTAAAAAGGAACGAGACGAAGCTAGGTCGATACTTGCACAGGC
AGAAAGGCAGTTCCCTATTTCTACTCCAAATTCTGTGACAGCTAATGCTCCTGTTCATAG
CAATGGGAAAAGAGCTGCTGATGACGAGGAGTTGGCACCTAATGCGAAGAAATTACATCC
TGGAATATCTTCTAGTATAATTTCTGAGCTAACAGACTGCAATGCTGCTCTTTCAGGGAA
GAGGAAAAAGCGAGAGATTCCTGCGACTTTGGCTTCTGTTGATGCTCTAGAGACATATAC
CCAGATATCTAGCCATCCCTTAAACAAAACTAGCAAACAGGGCATTATAGCTCTTGATAT
CCTTCATTCTAAGGACTTAATCGCAACTGGAAATATTGATACCAATGCTGTTATTTTTGA
CCGTCCATCAGGACAAGTATTAGCTACACTCACCGGTCACTCTAAAAAGGTAACAAGCGT
GAAGTTTGTAGGTCAGGGTGAATCTATCATAACTGGTTCAGCAGATAAGACAGTTCGTTT
GTGGCAAGGGTCAGACGATGGTCACTATAACTGCAAACAGATTTTGAAGGATCATTCTGC
TGAAGTGGAAGCTGTCACTGTCCATGCCACCAATAATTACTTTGTGACTGCATCACTTGA
TGGCAGTTGGTGCTTTTATGAACTGTCTTCAGGAACTTGTCTGACTCAGGTTTCTGACTC
TTCCGAAGGCTATACATCTGCAGCTTTTCATCCCGATGGTCTTATTCTTGGAACTGGCAC
TACAGATTCTCTTGTTAAGATCTGGGATGTAAAAAGTCAGGCAAATGTTGCTAAGTTTGA
TGGACATGTGGGGCATGTAACTGCAATATCCTTTTCTGAGAATGGATACTACCTTGCGAC
CGCAGCTCATGATGGTGTAAAGCTTTGGGATCTACGCAAGTTGAAAAACTTCCGGGATTA
TGGCCCATATGACTCAGCAACTCCAACAAACTCTGTGGAGTTTGACCACAGTGGATCCTA
CCTTGCAGTTGGAGGCTCTGATGTTAGGATATTACAAGTTGCAAATGTGAAATCTGAATG
GAACTTGATCAAAACTCTTCCTGATTTATCTGGAACAGGAAAATCCACATGTGTAAAATT
CGGTCCAGATTCAAAATACTTAGCAGTTGCATCAATGGACCGGAATCTTCGAATATTTGG
CCAACCTGGCGAAGACATTTCTGACAAATGATGAAGTTGTGCTCCATAGTCTTGCCGATC
CAGGGACAGTTGCTGCCTGCTATTAAAGCTTGGTCTAATTTCATTTGTTGGATAGTGAAT
GAAAGTTTTGATTAGTTTGATTCTTCAGTAGTTTTCCTTCACATACCATGGTGTATGTGG
AGTGGAGCAAATATATTCAAGGCTTTCTGCAGCAACATTACTATGCATTTGTTCTTTGTC
ATGAAAATCTGAAGTCTGTATTGTCCTCGGATAATTTTTAACGTGATTACTTACTAGTGA
GATAATGTAATTGTTGGCCTCTGCTACCAGAAATTTTTGTTGTTAGACATTAATAACTTT
GAGTAAAGAGCTTGTTAAAG
|
| EST members of Unigene |
DY617842 DY617476 CF069273 CA919806 AL389493 CX528131 CX527100 CX526960 CX525676 AW690368 BE325794 BF649355 BF645414 EV260688 BG580511 AW574184 AW684897 AW684189 CB891766 AW774716 AW774094 BQ147003 BI272518 BQ140890 BG452418 BG452242 AW257257 BE203804 CA989766 CA989706 CA858240 CA858236 BE324748 BI269219 CX535366 CX533358 CX533320 CX529261 BQ165515 BQ165514 BF632792 BI267736 BI266696 BG448952 EY477626
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10599 pre-mRNA-processing factor 19 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.10509.1.S1_at
|
| Corresponding NCBI Gene |
817897
|
| Trichome-related Gene from Literature |
N/A
|